CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGAA
TTCCGATATTATATCGAGGAATTTCACTTAAGAAGTTTGAGGTGCATAGT
AAGCAAAAATACAAGTAAATTACACAGAAGATAGACTTATTTTCTCCCAA
AAGAACAGGTCTATATTTATATGTATCATATGCAGATGTGTGTTTGTTAG
TTCAATATTTCCATGGTACCATCAAACGTCAGACTTCTTCCTTCTCTCTT
ACCTCATGGTGGGATCAACTATATCATTGGACTGTTTCTTCCTATGTGGC
TTCTGGTTACTTTGGTGGGTCCAAATGACAACGGGATTCATAACATGAAG
AATAAAGGTGGCTTTTTGGTAGAAGTACACTCCTTTTAAAGTTCATACAA
ATGTTGCTTAAATCACTGTTGATAAATAGGCATCATGCCAGAGCCCTTTC
AGGGAGGAGAGAGTCTGAATGAATGAAAGTCTAGATCATTTTTCTGCTTG
GGGTGTTATTTTCTTCACAATAAAAATGTATTCTCTGCATATCAGATACT
TTATACATAGAAAAAAGGCCAATGAACATAAACCTGATATATTCTATTAC
CAAAATGAATTTGTTTTCAATTCAAATTTCTAGTATTTTTTCACAAAAGA
TACACATCACTGAGAATGTACTTCAAGACAAACATTTGGGGCTGGAAAGA
TGGCTCAGTGGTTAAGAGCACCAATCGCTCTTCTAGAGATCTTG

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTATTGGTTTAGCTTAGTTGACACT
GTTGGTCTTCCTGTGGGGTTGCCATCTCCTTAAGGGCCTTCAATCCTTCC
CCTAACTCTTCCATAGAGGTCCCTAACGTCCATCCAATGTTTGTCTGTGG
CTTTTTGCATCTTTCTCAGTCAGCAGCTTCTCAGAGGCCTGCTATGCTAG
GGTCTTATTTGCAAGCACAACACAGCATCATTGATAGTATGAGAATTGGT
ACCTGTTCATGGAATGGGTCTCAAAATAGGCAGGCCAGTCAGTGGTTCCC
CATTCTTTCATTCTCTGCTCCATCTTTGTCCCTGCAATTCTTTTAGACAG
GTCAAATTTGGAGTCAAAAGTTTTGTAGGTGGGTTGATGTTCTCATCTCT
CCACTGGGGTGGGGGGTGGGTGTCTGGNTACTGAANGNGNTCTCTTNTGG
TTCCNTATTCCNNCTGTTGTACATTTCTGCCNCGATCACCTATGTTGACT
CCTTCCTCACCACTGGTCTCTGTGACTTTCTAGAGAATTCTTCAAAGNTA
TCCACTATCCTTGGCATCTTCTTATCCCCATTTACTCTTCTGTAACTCTG
GACCTCTTTATTGGCTCTCCCCTTGTCCGATCGTGGCCTCCTAGACCCTT
ACCCCTCTTGCTTCACATTTGGG

Query= MSMg01no271_a01.b1 MSMg01no271_a01.b1 CHROMAT_FILE:
MSMg01no271_a01.b1 PHD_FILE: MSMg01no271_a01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:47 2005
         (656 letters)



>mm_chr17_82716720_82717775
          Length = 1056

 Score = 1207 bits (624), Expect = 0.0
 Identities = 648/656 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaatttcacttaagaagtttgaggtgcatagtaagcaaaaatacaagtaaattacacaga 60
           ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 819 gaatttcacttaagaagtttgaggtgcatagtaagcagaaatacaagtaaattagacaga 760

                                                                       
Query: 61  agatagacttattttctcccaaaagaacaggtctatatttatatgtatcatatgcagatg 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 agataaacttattttctcccaaaagaacaggtctatatttatatgtatcatatgcagatg 700

                                                                       
Query: 121 tgtgtttgttagttcaatatttccatggtaccatcaaacgtcagacttcttccttctctc 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 699 tgtgtttgttagttcaatatttccatggtaccatcaaatgtcagacttcttccttctctc 640

                                                                       
Query: 181 ttacctcatggtgggatcaactatatcattggactgtttcttcctatgtggcttctggtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ttacctcatggtgggatcaactatatcattggactgtttcttcctatgtggcttctggtt 580

                                                                       
Query: 241 actttggtgggtccaaatgacaacgggattcataacatgaagaataaaggtggctttttg 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 579 actttggtgggtccaaatgacaacgggattcataacatgaagaataaaggtggcttgttg 520

                                                                       
Query: 301 gtagaagtacactccttttaaagttcatacaaatgttgcttaaatcactgttgataaata 360
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 519 gtagaagtacactccttttaaagtttatacaaatgttgcttaaatcactgttgataaata 460

                                                                       
Query: 361 ggcatcatgccagagccctttcagggaggagagagtctgaatgaatgaaagtctagatca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ggcatcatgccagagccctttcagggaggagagagtctgaatgaatgaaagtctagatca 400

                                                                       
Query: 421 tttttctgcttggggtgttattttcttcacaataaaaatgtattctctgcatatcagata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tttttctgcttggggtgttattttcttcacaataaaaatgtattctctgcatatcagata 340

                                                                       
Query: 481 ctttatacatagaaaaaaggccaatgaacataaacctgatatattctattaccaaaatga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ctttatacatagaaaaaaggccaatgaacataaacctgatatattctattaccaaaatga 280

                                                                       
Query: 541 atttgttttcaattcaaatttctagtattttttcacaaaagatacacatcactgagaatg 600
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 279 atttgttttcaattcaaatttctagtattttttcacgaaagatacacatcactgagaatg 220

                                                                   
Query: 601 tacttcaagacaaacatttggggctggaaagatggctcagtggttaagagcaccaa 656
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 219 tacttcaagacaaacatttggggctggagagatggctcagtggttaagagcaccaa 164


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)