Query= MSMg01no272_o15.b1 MSMg01no272_o15.b1 CHROMAT_FILE:
MSMg01no272_o15.b1 PHD_FILE: MSMg01no272_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:11 2005
(372 letters)
>mm_chr17_9667672_9668443
Length = 772
Score = 638 bits (330), Expect = 0.0
Identities = 357/366 (97%), Gaps = 2/366 (0%)
Strand = Plus / Minus
Query: 5 gaattctctgtttatgccctgtactccattttttaattgggaaaaggtcttcactaaccc 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gaattctctgttta-gctctgtactccattttttaattgggaaaaggtcttcactaaccc 593
Query: 65 tgtatctgatatagagccaatatccaaaatatataaagaactcaagaagttagagtccaa 124
||||||||||| || | |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 592 tgtatctgatagagggataatatccaaaatatataaagaactcaagaagttagagtcc-a 534
Query: 125 aaaaatcaattacttgtttctcactgcagagccttgtagtgttgattttgctccattgtt 184
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 533 aaaaatcaattacttgtttctcactgcagagccgtgtagtgttgattttgctccattgtt 474
Query: 185 tgtctcatagtttaaaatttatcttgttcatttcatacatgaacatgaggtatttagatt 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tgtctcatggtttaaaatttatcttgttcatttcatacatgaacatgaggtatttagatt 414
Query: 245 atgtacatccccatcagtctctgttacttccctcccattctttctgaagctctcttcttc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 atgtacatccccatcagtctctgttacttccctcccattctttctgaagctctcttcttc 354
Query: 305 cttcttccttcctctcctattctctccctctctctctctctctctctctctctctctctc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cttcttccttcctctcctattctctccctctctctctctctctctctctctctctctctc 294
Query: 365 tctctc 370
||||||
Sbjct: 293 tctctc 288
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 26
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_o15.g1 MSMg01no272_o15.g1 CHROMAT_FILE:
MSMg01no272_o15.g1 PHD_FILE: MSMg01no272_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:11 2005
(289 letters)
>mm_chr17_9515193_9515881
Length = 689
Score = 557 bits (288), Expect = e-163
Identities = 288/288 (100%)
Strand = Plus / Plus
Query: 1 tcagcacctttggggataagctttaattttctagccaacttgtggtactctgctaactgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagcacctttggggataagctttaattttctagccaacttgtggtactctgctaactgt 260
Query: 61 gcttcaagcgcctctttgcctctggtgtattttaattcctcattccacatttgttgttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcttcaagcgcctctttgcctctggtgtattttaattcctcattccacatttgttgttgt 320
Query: 121 tcagcttccaggtctttgcttaatttattgatagtctgctgcaattcattttttcccatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagcttccaggtctttgcttaatttattgatagtctgctgcaattcattttttcccatg 380
Query: 181 atttattctctcaatgtcagcggctgaatacttctggttatcagcgatactctgtagttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttattctctcaatgtcagcggctgaatacttctggttatcagcgatactctgtagttg 440
Query: 241 agtgttttcctgttccacattctagttctaatctaccaatttcttcat 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtgttttcctgttccacattctagttctaatctaccaatttcttcat 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
