Query= MSMg01no275_c13.b1 MSMg01no275_c13.b1 CHROMAT_FILE:
MSMg01no275_c13.b1 PHD_FILE: MSMg01no275_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:51 2005
(321 letters)
>mm_chr17_73288535_73289255
Length = 721
Score = 596 bits (308), Expect = e-175
Identities = 320/328 (97%), Gaps = 7/328 (2%)
Strand = Plus / Plus
Query: 1 atgagcaagacaactgtgaagagacaacaaatgaaaagaaggaccagtagagtccacgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgagcaagacaactgtgaagagacaacaaatgaaaagaaggaccagtagagtccacgca 260
Query: 61 ggctcgcctgggtcatgccagccagcacacctgaactgtttttcccatggtgatggaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctcgcctgggtcatgccagccagcacacctgaactgtttttcccatggtgatggaaga 320
Query: 121 agagaatgagccacagtcattgtgaaaatgtcaaacgaggcttccgttttgcacctgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagaatgagccacagtcattgtgaaaatgtcaaacgaggcttccgttttgcacctgaaa 380
Query: 181 atcaccgagtcggttttcttttcttcttcttttttttttttttttt-------ggtttgg 233
|||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 atcaccgagtcggttttcttttcttcttcttttttttttttttttttttttttggtttgt 440
Query: 234 ttttaaattcgttgagcaatggagccctctgacaacttgcaaggctgagaaaggaagttg 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttaaattcgttgagcaatggagccctctgacaacttgcaaggctgagaaaggaagttg 500
Query: 294 ctgagaacaggggtggaggggggggtgg 321
||||||||||||||||||||||||||||
Sbjct: 501 ctgagaacaggggtggaggggggggtgg 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_c13.g1 MSMg01no275_c13.g1 CHROMAT_FILE:
MSMg01no275_c13.g1 PHD_FILE: MSMg01no275_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:51 2005
(615 letters)
>mm_chr17_73459394_73460408
Length = 1015
Score = 1069 bits (553), Expect = 0.0
Identities = 594/615 (96%), Gaps = 12/615 (1%)
Strand = Plus / Minus
Query: 1 aatcccagtacaagaaagaaagagaaagggggcaggagccataggccggactcacaatgc 60
||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 742 aatcccagtacaagaaagaaaga------------gagccataggctggactcacaatgc 695
Query: 61 cagctgtatggtttaggacaaatgacttaaatgtcaacgagctccagtttcctcatctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 cagctgtatggtttaggacaaatgacttaaatgtcaacgagctccagtttcctcatctgt 635
Query: 121 taaagtacacactttacacggatgttgggtgactaagttgacacttacttataaggccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 taaagtacacactttacacggatgttgggtgactaagttgacacttacttataaggccct 575
Query: 181 tgacatgccacaagcacagtagaataaactaataaacgtcaattcttaccatactgtttt 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tgacatgccacaagcacagcagaataaactaataaacgtcaattcttaccatactgtttt 515
Query: 241 taagtcttttatatgaacacccctcccttagaaacctcaatgaatgtcatctctattcac 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 taagtcttttatatgaacacccctcccttagaaacctcaatgaatgtcatctctattcag 455
Query: 301 agacaaagcacctcacagaagttacataattaccacattttaagaagcaacctaactggg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 454 agacaaagcacctcacagaagttacataattaccacattttaagaagcaacctagctggg 395
Query: 361 tgtggtggcacatgcctttaatcctagcacttgggaggcagaggcaggcaaatttctgag 420
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 394 tgtggtggcgcatgcctttaatcctagcacttgggaggcagaggcaggcgaatttctgag 335
Query: 421 ttcagaccagcctggtcttcagagtgagttccaggacagccagggctatacagagaaacc 480
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 334 ttcagaccagcctggtcttcagagtgagttccaggacagccagagctgtacagagaaacc 275
Query: 481 ctgtctcggaaaaacaaaaacaaaaataagaagaagcagcccagggatccaccccataat 540
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 274 ctgtctcggaaaaacaaaaacaagaataagaagaagcagcccagggatccaccccataat 215
Query: 541 cagcttccaaacgctgacaccattgcatacactagcaagattttgctgaaaggacccaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 cagcttccaaacgctgacaccattgcatacactagcaagattttgctgaaaggacccaga 155
Query: 601 tagagctgtctcttg 615
|||||||||||||||
Sbjct: 154 tagagctgtctcttg 140
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space: 608025
Effective search space used: 608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
