Query= MSMg01no276_f21.b1 MSMg01no276_f21.b1 CHROMAT_FILE:
MSMg01no276_f21.b1 PHD_FILE: MSMg01no276_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:17 2005
(316 letters)
>mm_chr17_9232359_9233074
Length = 716
Score = 578 bits (299), Expect = e-169
Identities = 308/311 (99%)
Strand = Plus / Minus
Query: 5 gaattccagaattattcctttccactcagagagatcaactcttctttttcaacatcttca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gaattccagaattattcctttccactcagagagatcaactcttctttttcaacatcttca 456
Query: 65 gatgccgtccttccccaccaggaaaacaacaacaaacaaatcaaaacaaaaccattgcct 124
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gatgccgtcctttctcaccaggaaaacaacaacaaacaaatcaaaacaaaaccattgcct 396
Query: 125 tgctttggtctagaaaatcaacgcattagaaacagcctggagtcttgtcacaagtggagt 184
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ttctttggtctagaaaatcaacgcattagaaacagcctggagtcttgtcacaagtggagt 336
Query: 185 aattccattcctctctattcattggaattgctgttcaaatcctctccatgtgcaatggtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 aattccattcctctctattcattggaattgctgttcaaatcctctccatgtgcaatggtc 276
Query: 245 ttgatgtctgaggccctcaaactcatatacggaagcactaacccctaaggtgataaccac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttgatgtctgaggccctcaaactcatatacggaagcactaacccctaaggtgataaccac 216
Query: 305 aaggagcaaga 315
|||||||||||
Sbjct: 215 aaggagcaaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_f21.g1 MSMg01no276_f21.g1 CHROMAT_FILE:
MSMg01no276_f21.g1 PHD_FILE: MSMg01no276_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:17 2005
(284 letters)
>mm_chr17_9078285_9078969
Length = 685
Score = 491 bits (254), Expect = e-143
Identities = 279/292 (95%), Gaps = 8/292 (2%)
Strand = Plus / Plus
Query: 1 tttgacacggcagccgtaatgctgcagggagttttgacctgccttgcccaaactgttatt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 194 tttgacacggcagccgtaatgctgcagggagttttgacctgccttggaaaaactgttatt 253
Query: 61 gcaagcccgattctagcggctgcctctacttcccaacccctttgttttttg--------t 112
||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 254 gcaagcccgattctagcagctgcctctacttcccaacccctttgttttttgttttttgtt 313
Query: 113 tttttgtttttgtcctcctgcatgctaagaatcaagcccagccatcatccatgctcttat 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tttttgtttttgtcctcctgcatgctaagaatcaagcccagccatcatccatgctcttat 373
Query: 173 taagaaggctggggagggatagttgttagttctcccaggctgtgaagaaaccttgattta 232
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 374 taagaaggctggggagggatagttgttagttctgccaggctgtgaagaaaccttgattta 433
Query: 233 cttgttgcaatttctaatctacaaacaaaggataaaatatgaactaggaaat 284
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cttgttgcaatttctaatctacaaacaaaggataaaatatgaactaggaaat 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 685
Length adjustment: 9
Effective length of query: 275
Effective length of database: 676
Effective search space: 185900
Effective search space used: 185900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
