Query= MSMg01no277_m11.b1 MSMg01no277_m11.b1 CHROMAT_FILE:
MSMg01no277_m11.b1 PHD_FILE: MSMg01no277_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:58 2005
(315 letters)
>mm_chr17_25702447_25703163
Length = 717
Score = 534 bits (276), Expect = e-156
Identities = 301/310 (97%), Gaps = 2/310 (0%)
Strand = Plus / Minus
Query: 5 gaattcagaaagacatttgctgtcctttactcgctgtgtttcgttcctttctgaccaggc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gaattcagaaagacatttgctgtcctttactcgctgtgtttcgttcctttctgaccaggc 455
Query: 65 aatgctaactttcgcacagatcaatttgataaaattt--aaaaaaaaatgttttctctac 122
|||||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 454 aatgctaacttttgtacagataaatttgataaaatttaaaaaaaaaaatgttttctctac 395
Query: 123 ttggagcatgttttgagtattacttcttataattaagcctgggggttcttacaggaaggt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ttggagcatgttttgagtattacttcttataattaagcctgggggttcttacaggaaggt 335
Query: 183 tcctgtcagagatgggtgcaactctgctgagagcctgggtccagctgccttaagcaggcc 242
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tcctggcagagatgggtgcaactctgctgagagcctgggtccagctgccttaagcaggcc 275
Query: 243 actggggggaggggagcaagccagcccagactcctcttggtgggaacttcctcaccttag 302
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 274 actggggggaggggagcaagccagcccagactccccaaggtgggaacttcctcaccttag 215
Query: 303 ggaggtagcc 312
||||||||||
Sbjct: 214 ggaggtagcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 717
Length adjustment: 9
Effective length of query: 306
Effective length of database: 708
Effective search space: 216648
Effective search space used: 216648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no277_m11.g1 MSMg01no277_m11.g1 CHROMAT_FILE:
MSMg01no277_m11.g1 PHD_FILE: MSMg01no277_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:58 2005
(287 letters)
>mm_chr17_25530543_25531229
Length = 687
Score = 545 bits (282), Expect = e-160
Identities = 285/286 (99%)
Strand = Plus / Plus
Query: 1 ccccgagcggcacacgttgtagtactggttccagttgatgcaggcatctcggccggcacc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 ccccgagcggcacacgttgtagtactggttccagttgatgcaggcatttcggccggcacc 260
Query: 61 cccatcctcagcctgtggctgcccgtaggcctcccagccgagcgtgcactgcacgcgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccatcctcagcctgtggctgcccgtaggcctcccagccgagcgtgcactgcacgcgaag 320
Query: 121 ctcacggcggctggggatgtgtgagcatttctgcatgccgttgtcgcggcgtgaggagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcacggcggctggggatgtgtgagcatttctgcatgccgttgtcgcggcgtgaggagca 380
Query: 181 gatgaatgggttctcctcgccctcctctgtctggtagtatggccgcaagaaggtcaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgaatgggttctcctcgccctcctctgtctggtagtatggccgcaagaaggtcaggtt 440
Query: 241 gttgttcctgggttgcagaaggccagggcatcactaggggttcctg 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttgttcctgggttgcagaaggccagggcatcactaggggttcctg 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
