Query= MSMg01no279_a11.b1 MSMg01no279_a11.b1 CHROMAT_FILE:
MSMg01no279_a11.b1 PHD_FILE: MSMg01no279_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:31 2005
(368 letters)
>mm_chr17_48529361_48530128
Length = 768
Score = 634 bits (328), Expect = 0.0
Identities = 362/382 (94%), Gaps = 14/382 (3%)
Strand = Plus / Minus
Query: 1 ttacatgtttacatgtttattgtaccctcctgactgatgccagcctggcctagtcctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ttacatgtttacatgtttattgtaccctcctgactgatgccagcctggcctagtcctctt 340
Query: 61 tcttggtttagattaatatatccactgtcatgcctcttgtctccctttgcattttccaca 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 339 tcttggtttagattaatatatccactgtcatgcctcttgcctccctttgcattttccaca 280
Query: 121 tctcagggtggtggttgtcaggcaccacatcacaccttcttctacctttgttctctcacc 180
||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 279 tctcaggatggtggtcgtcaggcaccacatcacaccttctcctacctttgttctctcacc 220
Query: 181 ccatggttagtaagcat--------------attcatttgttcactgtttacctatttat 226
||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 219 ccatggttagtaagcatatgtctgggtctagattcatttgttcactgtttacctatttat 160
Query: 227 ctgtttctcttgcctggtccttggtccttacactttctagtctgtaatgttcttttctcc 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 ctgtttctcttgcctggtccttggtccttacactttctagtctgtaatgttcttttctcc 100
Query: 287 atcatttccatgactatcccttcttctttctgtgtagcctatgctgtcctcagatttgca 346
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 99 atcatttccatgactatcccttcttctctctgtgtagcctaggctgtcctcagatttgca 40
Query: 347 ctactcctaccccagtttccca 368
||||||||||||||||||||||
Sbjct: 39 ctactcctaccccagtttccca 18
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_a11.g1 MSMg01no279_a11.g1 CHROMAT_FILE:
MSMg01no279_a11.g1 PHD_FILE: MSMg01no279_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:31 2005
(363 letters)
>mm_chr17_48375569_48376331
Length = 763
Score = 687 bits (355), Expect = 0.0
Identities = 361/363 (99%)
Strand = Plus / Plus
Query: 1 agaagccacgtaaaaaagccagacccatcactaatcccggcactagggcatcagaaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaagccacgtaaaaaagccagacccatcactaatcccggcactagggcatcagaaagaa 260
Query: 61 ctggattcctgagactcactgaacagacagcccagctgagtcgtccagttccatgtaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctggattcctgagactcactgaacagacagcccagctgagtcgtccagttccatgtaaaa 320
Query: 121 cgtgagagaccttaggaaaaaatgagacagctaaatgacagtattctgaggtatgagcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgtgagagaccttaggaaaaaatgagacagctaaatgacagtattctgaggtatgagcga 380
Query: 181 tacctgaggtgggcctctgggcaggacaggcttgcgcacatgcacacacacaatagcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacctgaggtgggcctctgggcaggacaggcttgcgcacatgcacacacacaatagcatg 440
Query: 241 tactcacaaaagcattatttatcaagttcactttccacagaccacaaatcattgactctt 300
||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 tactcacaaaagcgttatttatcaagttcagtttccacagaccacaaatcattgactctt 500
Query: 301 gtactaaaacaaacaccaaacaagtccttcccagttgagagtttggacagacgtcattcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtactaaaacaaacaccaaacaagtccttcccagttgagagtttggacagacgtcattcc 560
Query: 361 cta 363
|||
Sbjct: 561 cta 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space: 266916
Effective search space used: 266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
