ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTATGTGTATACGCCCATCATGTCTTTTTGCATGAAGTTGTTCTCAT
GCTATGGCTTTCACAGCGTTTCTTCAGAAATTATAATGTCTTTTCAGACA
TGGATTACAAGGAAATTCAATGTAGTTTTATTCACACCTCCCTAATAGAT
AATAATGTCAAATATTTATTTGTTTATTATTAACTCATACTGTATTTTGA
GAACTTTGTTTATTTCCTTGTGCCATTTACTGATCTGGATTTTTGTATTT
TGAATAGTTACTTTTATGAGTTCTTTGTGTATCCAGTAAATTAATTCACC
ATCAGATCAACACTTAACCAAATATAGCCTCAAATTCTATGTGCTATCCA
TTATTTTTGTCCTCAGCTAAGCATAAGTTTATTATAACATTGAGTTATGT
TAGTTATTTTAATTTTCTCCTTCAAATTACACACAAAATATATAATAAAC
TAATGATTTACTTTAGAATATTTATAAGCTAATTTTTCTCTACAACATTA
AACTGATAAAACATAAATATATTTTTAAATAGTGCACATAAGTTCTGCTG
TAAAATATAAAGCTCAACAAACACATACAGACATAGACACACACTATATT
GTACACACATGAATCTCANTTTTTTTCAATGGATGCCATAATATACAAAA
TACTTGTAAGGTTAAAAACTGTGCTTTTCTGACATATTA

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGA
AGCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATC
AAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAA
AAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACAC
TCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCA
GTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCCAGC
AATACCTCTCCTGTGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGG
ACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGC
TGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTG
GTACATCTACACAATGGAGTACTACTCAGCTATTANAAAGAATGAATTTA
TGANATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAG
GTAACACATTCACAAAGAAACTCACACAATATGTATTCACTGATAAGTGG
ATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGCTAA
ACACATGAAACTCAAGAAGAATGAAGACTGAAGTGTGGACACT

Query= MSMg01no290_h01.b1 MSMg01no290_h01.b1 CHROMAT_FILE:
MSMg01no290_h01.b1 PHD_FILE: MSMg01no290_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:59 2005
         (593 letters)



>mm_chr17_59690005_59690998
          Length = 994

 Score =  837 bits (433), Expect = 0.0
 Identities = 469/481 (97%), Gaps = 3/481 (0%)
 Strand = Plus / Minus

                                                                       
Query: 115 caaggaaattcaatgtagttttattcacacctccctaatagataataatgtcaaatattt 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 caaggaaattcaatgtagttttattcacacctccctaatagataataatgtcaaatattt 935

                                                                       
Query: 175 atttgtttattattaactcatactgtattttgagaactttgtttatttccttgtgccatt 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 atttgtttattattaactcatactgtattttgagaactttgtttatttccttgtgccatt 875

                                                                       
Query: 235 tactgatctggatttttgtattttgaatagttacttttatgagttctttgtgtatccagt 294
           ||||||| |||||||||||||||||||||||||||||||||||||||||| |||| | ||
Sbjct: 874 tactgatttggatttttgtattttgaatagttacttttatgagttctttgcgtattctgt 815

                                                                       
Query: 295 aaattaattcaccatcagatcaacacttaaccaaatatagcctcaaattctatgtgctat 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 aaattaattcaccatcagatcaacacttaaccaaatatagcctcaaattctatgtgctat 755

                                                                       
Query: 355 ccattatttttgtcctcagctaagcataagtttattataacattgagttatgttagtta- 413
           |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| 
Sbjct: 754 ccattatttttgtcctcagctaagcataagtttattattacattgagtcatgttagttaa 695

                                                                       
Query: 414 ttttaattttctccttcaaattacacacaaaa-tatataataaactaatgatttacttta 472
           |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 694 ttttaattttcttcttcaaattacacacaaaaatatataataaactaatgatttacttta 635

                                                                       
Query: 473 gaatatttataagctaatttttctctacaacattaaactgataaaacataaatatatttt 532
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 634 gaatatttataagctaatttttctttacaacattaaactgataaaacataaatatatttt 575

                                                                       
Query: 533 taaatagtgcacataagttctgctgtaaaatataaagctcaacaaacacatacagacata 592
            ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 574 -aaatagtgcacataagttctgctataaaatataaagctcaacaaacacatacagacata 516

            
Query: 593 g 593
           |
Sbjct: 515 g 515


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 994
Length adjustment: 10
Effective length of query: 583
Effective length of database: 984
Effective search space:   573672
Effective search space used:   573672
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)