CTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAGGCCTTCCCGGTCTAATAATGAGTTCTAGGTTACCTAGAACCT
CAAAGTGAGACCCTGTCTTACTTAAAAAAGTTCTATACTTAGATGTTCCA
TGCCTTTTCCTAGGAGCTAAGAGATACAGGAGAACAAGAAAGCCCTGCTC
TTTTTGTTTTGGTTTGTCAAGACAGGGTCTGTCTGCATAGCTCTGGCTGT
CCTGGAACTCGATCTGTAGAAAAGCCTGGCCTCAAACTCAGAGATCTCCC
TGCTTCTGCTTCTACCCAGCAAAATCCTTGCTCTTAAGTTTATATACTAC
TGAGAGGAGATGGGTCAGGAAGCAAAATAGTTTCAGACAGTGTCAAGTAC
TTGTCATGCTATGCAGAGTAAATGTGAGGAGAAAATCACAGATAGGATGG
CCTGTAATGAGGACATAGAGGCAACCCACTCAAGAGCAGACTTGTAGCTT
GTAAAGGACCACGTGTTCCATATGTGCATCACTGGGCCTGAGAAGGGAGT
GTTACCTGGAGGGTAGGCGTGCTTGCCGTCTACAATCCACTCTAACAAGG
CCTCTATTAGTTCAAGGTTGACCTTTTCAAAATCCATCACAGACATTGTC
TTGATGACTGACTTGCTCACCCCTGAAAGAAAAGTACAGATCAGAAGACT
AATTCCACCTCCCAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXAAAAGTGATTGTTTGTAAGTCCTGGCTGAGGAGTTCATTG
TTTTTTACCGTTGAAATGGCTGTATTAAAGGGAGTATTGTCACATGAACA
GACATCCTGATTAACAGTGTTCCACCATGGCAGGTGGGGGAGGGGTGCTC
TGCATAAATAGCTTTTTAGTGTAATAAATGTTTCACAAGTCTTAAGACCT
TGCCATATTAAATGCCAAATGTAAATTCAAAGTAGGGCCAGAAAAAGGAA
GATTGATATCTCAAATTTAATATGCTGTATTCTGAATACTAGATATAATA
TGGATAGAGTTGAAGTTCAGAAGATTTTTGAATTATTGTGCACCAAATAA
CAAAGAATTGTTCAGGGGTTGAATTAGCTATAAGGCCAGCGAAATAACCG
TGGTCTGGGGTATGGCTCAGGTGGATGAATGCTTGCCTAACATGCATGAG
GCTTTGGGTTCAATCCCTGGCACCTCATGAACTGGGCATAGTGGCACATG
CCTGTCATCTCTGAATATAATGTTCAGGAGACAGAGGCAGGAGGATTAGA
AGTTCAAAGCCATCCTCAGTTATATAGCAAGTTTTGGGTCAGTCTGAGAT
ACATGAGGGCCTGTACCAAGAACTTGAGACTAGCTTCAGTAGTTGTTTGT

Query= MSMg01no290_i01.b1 MSMg01no290_i01.b1 CHROMAT_FILE:
MSMg01no290_i01.b1 PHD_FILE: MSMg01no290_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:05 2005
         (643 letters)



>mm_chr17_80656731_80657773
          Length = 1043

 Score = 1226 bits (634), Expect = 0.0
 Identities = 640/642 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ataatgagttctaggttacctagaacctcaaagtgagaccctgtcttacttaaaaaagtt 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 ataatgagttctaggttacctagaacctcaaagtgagaccctgtcttaattaaaaaagtt 260

                                                                       
Query: 61  ctatacttagatgttccatgccttttcctaggagctaagagatacaggagaacaagaaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatacttagatgttccatgccttttcctaggagctaagagatacaggagaacaagaaag 320

                                                                       
Query: 121 ccctgctctttttgttttggtttgtcaagacagggtctgtctgcatagctctggctgtcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccctgctctttttgttttggtttgtcaagacagggtctgtctgcatagctctggctgtcc 380

                                                                       
Query: 181 tggaactcgatctgtagaaaagcctggcctcaaactcagagatctccctgcttctgcttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggaactcgatctgtagaaaagcctggcctcaaactcagagatctccctgcttctgcttc 440

                                                                       
Query: 241 tacccagcaaaatccttgctcttaagtttatatactactgagaggagatgggtcaggaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacccagcaaaatccttgctcttaagtttatatactactgagaggagatgggtcaggaag 500

                                                                       
Query: 301 caaaatagtttcagacagtgtcaagtacttgtcatgctatgcagagtaaatgtgaggaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaaatagtttcagacagtgtcaagtacttgtcatgctatgcagagtaaatgtgaggaga 560

                                                                       
Query: 361 aaatcacagataggatggcctgtaatgaggacatagaggcaacccactcaagagcagact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatcacagataggatggcctgtaatgaggacatagaggcaacccactcaagagcagact 620

                                                                       
Query: 421 tgtagcttgtaaaggaccacgtgttccatatgtgcatcactgggcctgagaagggagtgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtagcttgtaaaggaccacgtgttccatatgtgcatcactgggcctgagaagggagtgt 680

                                                                       
Query: 481 tacctggagggtaggcgtgcttgccgtctacaatccactctaacaaggcctctattagtt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tacctggagggtaggcgtgcttgccgtctacaatccactctaacaaggcctctattagtt 740

                                                                       
Query: 541 caaggttgaccttttcaaaatccatcacagacattgtcttgatgactgacttgctcaccc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caaggttgaccttttcaaaatccatcacagacattgtcttgatgactgacttgctcaccc 800

                                                     
Query: 601 ctgaaagaaaagtacagatcagaagactaattccacctccca 642
           |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 801 ctgaaagaaaagtaaagatcagaagactaattccacctccca 842


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space:   653889
Effective search space used:   653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no290_i01.g1 MSMg01no290_i01.g1 CHROMAT_FILE:
MSMg01no290_i01.g1 PHD_FILE: MSMg01no290_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:05 2005
         (598 letters)



>mm_chr17_80827037_80828034
          Length = 998

 Score = 1096 bits (567), Expect = 0.0
 Identities = 585/591 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaagtgattgtttgtaagtcctggctgaggagttcattgttttttaccgttgaaatggc 60
           ||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||
Sbjct: 591 aaaagtgattgtttgtaagtcctggctgaggagttcattgtttcttagggttgaaatggc 532

                                                                       
Query: 61  tgtattaaagggagtattgtcacatgaacagacatcctgattaacagtgttccaccatgg 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 531 tgtattaaagggagtattgtcacatgaacagacatcctgattaacagtgttctaccatgg 472

                                                                       
Query: 121 caggtgggggaggggtgctctgcataaatagctttttagtgtaataaatgtttcacaagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 caggtgggggaggggtgctctgcataaatagctttttagtgtaataaatgtttcacaagt 412

                                                                       
Query: 181 cttaagaccttgccatattaaatgccaaatgtaaattcaaagtagggccagaaaaaggaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cttaagaccttgccatattaaatgccaaatgtaaattcaaagtagggccagaaaaaggaa 352

                                                                       
Query: 241 gattgatatctcaaatttaatatgctgtattctgaatactagatataatatggatagagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gattgatatctcaaatttaatatgctgtattctgaatactagatataatatggatagagt 292

                                                                       
Query: 301 tgaagttcagaagatttttgaattattgtgcaccaaataacaaagaattgttcaggggtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tgaagttcagaagatttttgaattattgtgcaccaaataacaaagaattgttcaggggtt 232

                                                                       
Query: 361 gaattagctataaggccagcgaaataaccgtggtctggggtatggctcaggtggatgaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gaattagctataaggccagcgaaataaccgtggtctggggtatggctcaggtggatgaat 172

                                                                       
Query: 421 gcttgcctaacatgcatgaggctttgggttcaatccctggcacctcatgaactgggcata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 gcttgcctaacatgcatgaggctttgggttcaatccctggcacctcatgaactgggcata 112

                                                                       
Query: 481 gtggcacatgcctgtcatctctgaatataatgttcaggagacagaggcaggaggattaga 540
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 111 gtggcacatgcctgtcatctctgaatgtaatgttcaggagacagaggcaggaggattaga 52

                                                              
Query: 541 agttcaaagccatcctcagttatatagcaagttttgggtcagtctgagata 591
           ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 51  agttcaaagccatcctcagttatatagtaagttttgggtcagtctgagata 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space:   580944
Effective search space used:   580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)