Query= MSMg01no291_g09.b1 MSMg01no291_g09.b1 CHROMAT_FILE:
MSMg01no291_g09.b1 PHD_FILE: MSMg01no291_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:10 2005
(249 letters)
>mm_chr17_34355826_34356475
Length = 650
Score = 435 bits (225), Expect = e-126
Identities = 243/249 (97%), Gaps = 2/249 (0%)
Strand = Plus / Plus
Query: 1 acccatccacctcttagcccagagagaagccttacccagagtcctttcttctcccacaaa 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 acccatccacctcttagcccagagagaagccttacccagagtccttccttctcccacaaa 260
Query: 61 atattccttcttataagaggaaagaattcttttttt-cttgagacctgggagagaatctt 119
|||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 261 atatcccttcttataagaggaaaaaattcttttttttcttgagacctgggagagaatctt 320
Query: 120 aaaaataatatagcaggggctggagaggtggctcagtggttaaggctgctcttccaactg 179
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaataatatagcaggggctggagaagtggctcagtggttaaggctgctcttccaactg 380
Query: 180 taactccagttccagggggatctggcgcccccttctggcctacataggcactgcgttcac 239
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taactccagttccagggg-atctggcgcccccttctggcctacataggcactgcgttcac 439
Query: 240 atgcaacac 248
|||||||||
Sbjct: 440 atgcaacac 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 650
Length adjustment: 9
Effective length of query: 240
Effective length of database: 641
Effective search space: 153840
Effective search space used: 153840
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no291_g09.g1 MSMg01no291_g09.g1 CHROMAT_FILE:
MSMg01no291_g09.g1 PHD_FILE: MSMg01no291_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:10 2005
(221 letters)
>mm_chr17_34530018_34530638
Length = 621
Score = 398 bits (206), Expect = e-115
Identities = 218/222 (98%), Gaps = 1/222 (0%)
Strand = Plus / Minus
Query: 1 catctccaaattatttctaagggtggtggtcattactaaagttctttctgagaggggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 catctccaaattatttctaagggtggtggtcattactaaagttctttctgagaggggagg 481
Query: 61 ttgaatcattaacctgctctagcagcaatggttggaaaagaccaatcattaataatga-t 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 480 ttgaatcattaacctgctctagcagcaatggttggaaaagaccaatcattaataatgatt 421
Query: 120 ttttttttttactcttgcacaacagattttattggttgaggagcagagtacacagacatt 179
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 420 ttttttttttactctttcacaacagattttattggttgaagagcagagtacacagacatt 361
Query: 180 ccaattcttatcatacgtacccaaaaagagccttaaactgtg 221
||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 360 ccaattcttatcatacgtacccaaaaagagccttatactgtg 319
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 621
Length adjustment: 9
Effective length of query: 212
Effective length of database: 612
Effective search space: 129744
Effective search space used: 129744
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
