MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-295O22
Chromosome	17 (Build37)
Map Location	79,854,028 - 80,019,522
singlet/doublet	doublet
Overlap gene	LOC639964, AW061290
Upstream gene	LOC100043888, Hdac1-ps, Vit, Strn, Heatr5b, 2310002B06Rik, EG625054, Eif2ak2, 2410078J06Rik, Cebpz, 2410091C18Rik, Prkcn, LOC675425, Qpct, LOC668812, LOC383277, Cdc42ep3
Downstream gene	Cyp1b1, EG668821, Arl6ip2, LOC625074, Hnrpll, Gpx4-ps, Galm, Sfrs7, 4930560E09Rik, Gemin6, Dhx57, Morn2, Sos1, Cdkl4, F420015M19Rik, Map4k3
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100043888 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Hdac1-ps (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:15181
definition	gene_synonym : HD1; Hdac1; RPD3 note : histone deacetylase 1 pseudogene pseudo : _no_value

name	Vit (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74199 MGI:1921449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Strn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268980 MGI:1333757
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Heatr5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320473 MGI:2444098
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310002B06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53951 MGI:1858435
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625054 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625054 MGI:3644071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Eif2ak2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19106 MGI:1353449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410078J06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73671 MGI:1920921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins

name	Cebpz (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12607 MGI:109386
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410091C18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73694 MGI:1920944
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Prkcn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75292 MGI:1922542
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675425 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675425
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	Qpct (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70536 MGI:1917786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668812 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668812
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	LOC383277 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 Proteins pseudo : _no_value

name	Cdc42ep3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:260409 MGI:2384718
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC639964 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:639964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	AW061290 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381110 MGI:2147043
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp1b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13078 MGI:88590
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668821 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668821 MGI:3644108
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Arl6ip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56298 MGI:1929492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC625074 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625074
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 389 ESTs, 5 Proteins pseudo : _no_value

name	Hnrpll (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72692 MGI:1919942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpx4-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110531 MGI:1890509
definition	note : glutathione peroxidase 4, pseudogene pseudo : _no_value

name	Galm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319625 MGI:2442420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sfrs7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225027 MGI:1926232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930560E09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67737 MGI:1914987
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 3 ESTs, 8 Proteins

name	Gemin6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67242 MGI:1914492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dhx57 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106794 MGI:2147067
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Morn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:378462 MGI:2674071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sos1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20662 MGI:98354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdkl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381113 MGI:3587025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	F420015M19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619329 MGI:3588283
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein

name	Map4k3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225028 MGI:2154405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043888 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268917 GeneID:100043888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043888 transcript_id : XM_001481193.1

name	Vit (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037354 GeneID:74199 MGI:1921449
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vitrin transcript_id : NM_028813.1

name	Strn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61098077 GeneID:268980 MGI:1333757
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : striatin, calmodulin binding protein transcript_id : NM_011500.2

name	Heatr5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487156 GeneID:320473 MGI:2444098
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HEAT repeat containing 5B transcript_id : NM_001081179.1

name	2310002B06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130682 GeneID:53951 MGI:1858435
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310002B06 gene transcript_id : NM_181649.4

name	Eif2ak2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227203 GeneID:19106 MGI:1353449
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 2-alpha kinase 2 transcript_id : NM_011163.3

name	2410078J06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268919 GeneID:73671 MGI:1920921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins product : RIKEN cDNA 2410078J06 gene, transcript variant 1 transcript_id : XM_356960.5

name	Cebpz (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95006993 GeneID:12607 MGI:109386
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CCAAT/enhancer binding protein zeta transcript_id : NM_001024806.2

name	2410091C18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385424 GeneID:73694 MGI:1920944
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410091C18 gene transcript_id : NM_028611.2

name	2410091C18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450839 GeneID:73694 MGI:1920944
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410091C18 gene transcript_id : NM_144760.1

name	Prkcn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27753988 GeneID:75292 MGI:1922542
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C, nu transcript_id : NM_029239.2

name	Qpct (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353769 GeneID:70536 MGI:1917786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutaminyl-peptide cyclotransferase (glutaminyl cyclase) transcript_id : NM_027455.2

name	Cdc42ep3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367815 GeneID:260409 MGI:2384718
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CDC42 effector protein (Rho GTPase binding) 3 transcript_id : NM_026514.2

name	LOC639964 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268817 GeneID:639964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : similar to MOB1, Mps One Binder kinase activator-like 2B (yeast) transcript_id : XM_001480729.1

name	AW061290 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376382 GeneID:381110 MGI:2147043
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AW061290 transcript_id : NM_201361.2

name	Cyp1b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753567 GeneID:13078 MGI:88590
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 1, subfamily b, polypeptide 1 transcript_id : NM_009994.1

name	EG668821 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402172 GeneID:668821 MGI:3644108
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG668821 transcript_id : XM_001003779.1

name	Arl6ip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119372303 GeneID:56298 MGI:1929492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 6 interacting protein 2 transcript_id : NM_178050.3

name	Arl6ip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119372299 GeneID:56298 MGI:1929492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 6 interacting protein 2 transcript_id : NM_019717.2

name	Hnrpll (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347534 GeneID:72692 MGI:1919942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein L-like transcript_id : NM_144802.3

name	Galm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387049 GeneID:319625 MGI:2442420
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : galactose mutarotase transcript_id : NM_176963.3

name	Sfrs7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122584 GeneID:225027 MGI:1926232
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor, arginine/serine-rich 7 transcript_id : NM_146083.1

name	4930560E09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402174 GeneID:67737 MGI:1914987
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 3 ESTs, 8 Proteins product : RIKEN cDNA 4930560E09 gene transcript_id : XM_283466.6

name	Gemin6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802223 GeneID:67242 MGI:1914492
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gem (nuclear organelle) associated protein 6 transcript_id : NM_026053.2

name	Dhx57 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39573733 GeneID:106794 MGI:2147067
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 transcript_id : NM_198942.1

name	Morn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34850747 GeneID:378462 MGI:2674071
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MORN repeat containing 2 transcript_id : NM_194269.1

name	Sos1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117414169 GeneID:20662 MGI:98354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Son of sevenless homolog 1 (Drosophila) transcript_id : NM_009231.2

name	Cdkl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343651 GeneID:381113 MGI:3587025
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase-like 4 transcript_id : NM_001033443.2

name	F420015M19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402179 GeneID:619329 MGI:3588283
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein product : RIKEN cDNA F420015M19 gene transcript_id : XM_001003844.1

name	Map4k3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486874 GeneID:225028 MGI:2154405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen-activated protein kinase kinase kinase kinase 3 transcript_id : NM_001081357.1

name	LOC100043888 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268918 GeneID:100043888
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481243.1

name	Vit (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037355 GeneID:74199 MGI:1921449
definition	codon_start : 1 product : vitrin protein_id : NP_083089.1

name	Strn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098078 CCDS:CCDS28978.1 GeneID:268980 MGI:1333757
definition	GO_function : GO:0005516 - calmodulin binding [Evidence IEA] codon_start : 1 product : striatin, calmodulin binding protein protein_id : NP_035630.2

name	Heatr5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487157 GeneID:320473 MGI:2444098
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : HEAT repeat containing 5B protein_id : NP_001074648.1

name	2310002B06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62461575 CCDS:CCDS28979.1 GeneID:53951 MGI:1858435
definition	codon_start : 1 product : hypothetical protein LOC53951 protein_id : NP_857632.2

name	Eif2ak2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755160 CCDS:CCDS28980.1 GeneID:19106 MGI:1353449
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003725 - double-stranded RNA binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0006412 - protein biosynthesis [Evidence IDA]; GO:0009615 - response to virus [Evidence IEA]; GO:0030968 - unfolded protein response [Evidence IDA]; GO:0006926 - virus-infected cell apoptosis [Evidence IDA] codon_start : 1 note : protein kinase, interferon inducible double stranded RNA dependent; T-cell viral integration site; eukaryotic translation initiation factor 2 alpha kinase 2; eIF-2 alpha; dsRNA-activated kinase; IFN- type I-induced and dsRNA-activated kinase; IFN-induced and double-stranded RNA-activated kinase product : protein kinase, interferon-inducible double stranded RNA dependent protein_id : NP_035293.1

name	2410078J06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268920 GeneID:73671 MGI:1920921
definition	codon_start : 1 product : hypothetical protein LOC73671 isoform 1 protein_id : XP_356960.5

name	Cebpz (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67188876 CCDS:CCDS28981.1 GeneID:12607 MGI:109386
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : CCAAT/enhancer binding protein alpha (C/EBP) related sequence 1; CCAAT-binding factor product : CCAAT/enhancer binding protein zeta protein_id : NP_001019977.1

name	2410091C18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229156 CCDS:CCDS28982.1 GeneID:73694 MGI:1920944
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC73694 isoform 1 protein_id : NP_082887.1

name	2410091C18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450840 GeneID:73694 MGI:1920944
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC73694 isoform 2 protein_id : NP_658905.1

name	Prkcn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27753989 GeneID:75292 MGI:1922542
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : protein kinase D3 protein_id : NP_083515.2

name	Qpct (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625782 CCDS:CCDS28983.1 GeneID:70536 MGI:1917786
definition	GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0016603 - glutaminyl-peptide cyclotransferase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : glutaminyl-peptide cyclotransferase (glutaminyl cyclase) protein_id : NP_081731.1

name	Cdc42ep3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386006 CCDS:CCDS28984.1 GeneID:260409 MGI:2384718
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008360 - regulation of cell shape [Evidence IEA] codon_start : 1 product : CDC42 effector protein (Rho GTPase binding) 3 protein_id : NP_080790.1

name	LOC639964 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268818 GeneID:639964
definition	codon_start : 1 product : similar to MOB1, Mps One Binder kinase activator-like 2B (yeast) protein_id : XP_001480779.1

name	AW061290 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41235741 CCDS:CCDS28985.1 GeneID:381110 MGI:2147043
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC381110 protein_id : NP_958749.1

name	Cyp1b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753568 CCDS:CCDS28986.1 GeneID:13078 MGI:88590
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0050381 - unspecific monooxygenase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : cytochrome P450, 1b1, benz[a]anthracene inducible product : cytochrome P450, family 1, subfamily b, polypeptide 1 protein_id : NP_034124.1

name	EG668821 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94402173 GeneID:668821 MGI:3644108
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001003779.1

name	Arl6ip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119372300 GeneID:56298 MGI:1929492
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; ARL-6 interacting protein-2; ADP-ribosylation-like factor 6 interacting protein 2 product : ADP-ribosylation factor-like 6 interacting protein 2 isoform 1 protein_id : NP_062691.3

name	Arl6ip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119372304 GeneID:56298 MGI:1929492
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; ARL-6 interacting protein-2; ADP-ribosylation-like factor 6 interacting protein 2 product : ADP-ribosylation factor-like 6 interacting protein 2 isoform 2 protein_id : NP_835151.2

name	Hnrpll (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347535 GeneID:72692 MGI:1919942
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0019028 - viral capsid [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA] codon_start : 1 product : heterogeneous nuclear ribonucleoprotein L-like protein_id : NP_659051.3

name	Galm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892785 CCDS:CCDS28987.1 GeneID:319625 MGI:2442420
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004034 - aldose 1-epimerase activity [Evidence IEA] [Evidence ISS]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence ISS] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] [Evidence ISS]; GO:0006012 - galactose metabolism [Evidence IEA] codon_start : 1 product : aldose 1-epimerase protein_id : NP_795937.1

name	Sfrs7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122585 CCDS:CCDS28988.1 GeneID:225027 MGI:1926232
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 note : splicing factor, arginine/serine-rich 7 (35kD) product : splicing factor, arginine/serine-rich 7 protein_id : NP_666195.1

name	4930560E09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51770412 GeneID:67737 MGI:1914987
definition	codon_start : 1 product : hypothetical protein LOC67737 protein_id : XP_283466.3

name	Gemin6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313050 CCDS:CCDS28989.1 GeneID:67242 MGI:1914492
definition	GO_component : GO:0016604 - nuclear body [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0000245 - spliceosome assembly [Evidence IEA] codon_start : 1 product : gem (nuclear organelle) associated protein 6 protein_id : NP_080329.1

name	Dhx57 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39573734 CCDS:CCDS28990.1 GeneID:106794 MGI:2147067
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 homolog protein_id : NP_945180.1

name	Morn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34850748 GeneID:378462 MGI:2674071
definition	codon_start : 1 product : protein containing single MORN motif in testis protein_id : NP_919245.1

name	Sos1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117414170 GeneID:20662 MGI:98354
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0000786 - nucleosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005088 - Ras guanyl-nucleotide exchange factor activity [Evidence IMP]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]; GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IMP] codon_start : 1 note : guanine nucleotide releasing factor; son-of-sevenless 1; ras guanine exchange factor product : son of sevenless 1 protein_id : NP_033257.2

name	Cdkl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370314 CCDS:CCDS28992.1 GeneID:381113 MGI:3587025
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : cyclin-dependent kinase-like 4 protein_id : NP_001028615.1

name	F420015M19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94402180 GeneID:619329 MGI:3588283
definition	codon_start : 1 product : similar to putative retrovirus-related gag protein protein_id : XP_001003844.1

name	Map4k3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486875 GeneID:225028 MGI:2154405
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA] [Evidence ISS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS] [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0005083 - small GTPase regulator activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence ISS] [Evidence IEA]; GO:0007243 - protein kinase cascade [Evidence ISS]; GO:0006950 - response to stress [Evidence ISS] codon_start : 1 note : germinal center kinase-like kinase-like product : mitogen-activated protein kinase kinase kinase kinase 3 protein_id : NP_001074826.1

name	LOC675425 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675425
definition	number : 1 pseudo : _no_value

name	LOC675425 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675425
definition	number : 2 pseudo : _no_value

name	LOC675425 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675425
definition	number : 3 pseudo : _no_value

name	LOC383277 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383277
definition	number : 3 pseudo : _no_value

name	LOC383277 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383277
definition	number : 2 pseudo : _no_value

name	LOC383277 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383277
definition	number : 1 pseudo : _no_value

name	EG625054 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:126090591 GeneID:625054 MGI:3644071
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG625054 pseudo : _no_value transcript_id : NR_003363.1

name	LOC668812 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268816 GeneID:668812
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to ribosomal protein pseudo : _no_value transcript_id : XR_034816.1

name	LOC625074 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268921 GeneID:625074
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 389 ESTs, 5 Proteins product : similar to eukaryotic translation initiation factor 3, subunit 3 gamma, 40kDa pseudo : _no_value transcript_id : XR_035043.1

clone name	MSMg01-536I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195J07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-447N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387L11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-161P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342J01
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-295O22.T7 (MSMg01no295_o22.b1)	MSMg01-295O22.TJ (MSMg01no295_o22.g1)
ACC	AG423683	AG423684
length	772	777
length of high quality (start - end)	323 (42 - 364)	292 (73 - 364)
definition	CHROMAT_FILE: MSMg01no295_o22.b1 PHD_FILE: MSMg01no295_o22.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:31:59 2005	CHROMAT_FILE: MSMg01no295_o22.g1 PHD_FILE: MSMg01no295_o22.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:32:00 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(80,019,204 - 80,019,522)	(79,854,028 - 79,854,317)
sequence	TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT CATCAGACTTGCACAGAAGCAGACCAGAGGCAATCGAATCAGCAAACAAA GGCCTTAAAACAATCATTTAAAGCATTCGCCAATTATTGTGAATAAGTTA AAATGTTGCCATATTATAAATGTACAAATATATTCATGATAAGGATACAC GTGATGAGGGGAGAAAAAAGAAAGTTTTAAGTCAGACTGTTTGGAATTTC TAGAAATGAAAACTAAGATATCTGGGAAAAAGGCTTTATGAAGTAAAATT GACAGTAATGAAAACACCACAGGAGGACAAAGAGTAGTGCACGGGAAGAC ACGGCAGTAAAAGTCATCTCCCGGATGCACCACGATGGGGAGACACTAAC GACCAGGACAGTAGACATCAAGAACATCCAAGATGGACAGGAGCGTAGAA TGGAAGAAGGGGAGCAAACGAGTCCTAAATTAAAGAGAAGCCAACGAAGT CAAACAGTGAGAAACCAAAGTGGACTAGTATTCTGTTGATAAGGATGGAG GGTGGAGTGGGGAAGAGAGCCAGAATGAGGAGGGAGGAGTGGGAAATTTT TTTTNTTTTTTTTTTTTTTTTTTNTTTTTTTTATTTNGGTTAGTAATTTG GAATATTATATATTATTTAATATCTTTTAACTTTTTTTTTTTTTTATAAA TTTGATATTATACCTATCCCATTTACTTATTTTTAATTCATCCTATCCCT CTTTTCTTTTTTCCCATTTTTA	GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXCTGGCTTCCCACAAAGGATAGGTCAAGG AGAGGGGACAGGCTTTTGTGATGCTGTGTACACCACAGCTATTCTTTCTC AGGCCTAACCCAGTCCACTGAAGTACATCAGCCTCTGCAGTGGGAAGGCC CTGAGTTTATTTTGCTGTGTGGCATTAAATGCTCAGGGTAATTACACATG ATGCCCGTCTATCAGGCAGGACGGGGTCAAACTCTGCAGCCAACGCACAG CTGCTGTGTTCGTGACTACGTATTAAATGTGCTTTTGCTCACAATTGTCA AAGCCGTATTGATTGCTGCTCTGCCCCTCCCACCCTGCATCCCCAGGCTC CAGTCAAAACAAAGTTTGCCTCTTTCAATGAGAAACACATGCAGGCAGGC TCCTTCAGAGCCCTGATGTCAGCTTTTTGCATGGGGATGTTGGCCAAGAA GGCACGGTTGCTCTTCCCTGCCTGGGCAAAGATTTGAGATTTGATGATGT ATCTCATTTTTACTGAGACTCCAGAGTAAAAAACAAAACAAAACAAAACA AAACAAAAACCCACTTCATCATCAGTAATATAAAGCAGCACACACAGCCC TCGACAAAAGTAGCCACTCAGCAGCAGCTTTCTCTCAGCTCTACTCTGGT CTTTGGGGGGCAGTTTAGCTTCTGCCGTTAGACCTATAAAAACGCTATAT TGAGACTATTTCCCTGGGTCCCAGCGT
quality values	Open. Hide. 11 11 19 22 43 59 43 37 37 37 31 17 19 9 9 9 19 19 37 44 48 28 28 28 28 28 35 39 57 53 57 57 57 57 57 57 42 29 17 24 24 42 41 57 57 42 42 47 47 50 50 68 50 50 43 43 50 54 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 50 50 47 47 50 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 59 44 41 27 33 32 43 43 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 48 48 47 47 47 46 48 48 57 59 59 59 59 54 48 59 59 59 59 59 57 48 59 59 48 48 57 57 57 53 53 53 53 50 50 59 41 34 32 21 21 11 11 10 9 9 9 10 10 12 22 28 28 24 21 13 13 13 15 18 19 28 24 30 30 37 59 57 57 57 57 53 53 53 57 68 68 68 68 68 57 57 54 68 54 54 54 54 57 59 54 30 30 21 19 24 18 17 17 24 30 43 59 59 57 57 43 43 24 24 18 26 18 25 26 39 39 39 43 48 50 50 59 59 59 47 41 43 43 41 37 44 59 59 59 59 59 59 59 59 48 59 48 57 57 57 48 48 48 59 59 59 59 59 48 48 57 57 48 48 48 57 57 59 59 57 48 48 42 47 47 48 48 57 57 57 57 48 48 48 57 59 59 59 59 59 59 59 59 47 41 37 37 37 37 47 44 59 44 36 39 35 37 37 37 37 40 40 43 43 48 48 48 57 48 57 48 39 39 39 37 37 37 37 37 37 47 47 41 37 21 18 18 19 22 27 31 31 44 41 41 39 40 37 43 37 41 31 31 30 21 16 11 11 11 17 13 14 14 14 14 18 24 37 39 37 26 20 12 9 9 9 9 9 9 9 23 12 11 11 13 3 0 3 17 19 20 19 13 8 7 7 6 6 6 7 7 8 8 8 3 0 3 9 9 23 18 14 15 9 9 9 18 3 0 3 10 10 10 11 11 11 14 12 10 10 6 6 6 6 8 8 10 8 8 8 8 8 10 10 11 8 8 9 14 15 11 11 12 11 10 13 18 13 13 11 10 8 8 8 13 8 9 9 14 12 15 15 18 16 17 16 10 9 9 9 10 13 11 11 9 9 9 9 9 9 8 8 6 6 8 10 10 11 11 15 12 11 11 10 10 8 6 6 10 8 10 8 10 10 9 9 9 11 11 10 10 10 10 16 10 10 9 10 9 9 11 11 8 8 10 10 8 10 10 14 19 8 8 8 8 8 8 10 12 10 10 10 8 8	Open. Hide. 6 6 6 6 8 15 16 32 32 37 37 37 37 50 39 44 50 53 53 53 57 57 57 57 59 57 57 57 44 44 43 43 43 48 42 36 36 36 40 42 57 57 57 57 54 54 68 68 68 68 68 54 54 54 57 57 57 48 50 41 41 46 50 57 57 57 50 50 50 50 50 51 68 68 68 68 68 68 68 51 50 50 50 50 50 68 68 47 47 42 42 42 47 47 47 43 43 40 42 53 50 50 50 59 59 53 50 50 50 50 50 50 59 59 33 33 16 12 11 11 11 11 11 11 12 12 25 28 39 41 41 41 48 48 50 50 50 50 53 53 53 53 53 53 57 57 59 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 54 54 50 50 50 50 50 50 57 57 57 68 57 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 68 57 57 57 57 57 57 59 68 59 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 54 44 44 37 30 30 30 33 42 47 59 59 68 68 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 53 50 50 50 50 41 29 22 18 16 11 9 9 9 9 9 9 9 11 11 12 12 12 8 8 8 8 7 6 6 6 7 10 19 24 37 37 41 47 48 48 48 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 43 32 28 28 28 37 37 43 48 44 37 37 26 26 12 12 8 6 6 6 6 6 10 11 11 12 20 12 24 25 41 43 19 15 8 8 8 11 13 37 34 30 28 30 34 59 59 59 59 57 50 53 53 53 53 57 59 59 59 59 59 59 59 59 59 68 68 59 59 57 48 46 43 43 46 47 50 48 48 47 54 54 54 57 57 54 54 57 57 57 57 57 59 59 59 59 59 59 54 57 57 57 57 68 57 57 57 54 54 57 57 59 59 68 59 59 44 57 43 46 46 57 59 57 57 48 48 48 57 59 59 59 59 59 59 54 54 54 59 59 68 68 68 68 68 68 68 68 68 59 59 59 48 48 43 59 44 46 43 46 46 42 59 39 35 35 59 43 43 43 43 36 36 37 36 28 25 25 33 43 39 47 47 39 39 43 36 36 43 41 50 59 59 59 59 44 37 37 44 39 39 41 46 41 40 43 43 43 43 43 43 41 41 59 41 41 41 39 34 37 43 41 37 39 32 32 20 32 32 37 37 41 41 41 37 32 34 34 37 30 28 27 22 29 32 37 37 37 37 32 28 19 21 21 18 12 11 11 23 23 48 48 48 57 57 57 44 46 48 48 48 37 37 37 31 32 23 31 33 43 47 37 41 28 27 17 21 11 21 21 30 30 12 15 8 8 8 13 16 8 8 8 9 8 10 14 24 22 33 33 30 19 19 31 24 28 17 18 10 12 12 16 20 13 14 15 16 16 16 24 24 24 26 20 12 12 12 12 13 11 10 8 10 8 10 11 17 17 14 12 12 14 18 11 15 9 12 12 11 11 6 6 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no295_o22.b1 MSMg01no295_o22.b1 CHROMAT_FILE:
MSMg01no295_o22.b1 PHD_FILE: MSMg01no295_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:59 2005
         (323 letters)



>mm_chr17_80019000_80019722
          Length = 723

 Score =  601 bits (311), Expect = e-176
 Identities = 317/319 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatcagacttgcacagaagcagaccagaggcaatcgaatcagcaaacaaaggcct 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gaattcatcagacttgcacagaagcagaccagaggcaatcgaatcagcaaacaaaggcct 464

                                                                       
Query: 65  taaaacaatcatttaaagcattcgccaattattgtgaataagttaaaatgttgccatatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 taaaacaatcatttaaagcattcgccaattattgtgaataagttaaaatgttgccatatt 404

                                                                       
Query: 125 ataaatgtacaaatatattcatgataaggatacacgtgatgaggggagaaaaaagaaagt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ataaatgtacaaatatattcatgataaggatacacgtgatgaggggagaaaaaagaaagt 344

                                                                       
Query: 185 tttaagtcagactgtttggaatttctagaaatgaaaactaagatatctgggaaaaaggct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tttaagtcagactgtttggaatttctagaaatgaaaactaagatatctgggaaaaaggct 284

                                                                       
Query: 245 ttatgaagtaaaattgacagtaatgaaaacaccacaggaggacaaagagtagtgcacggg 304
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 283 ttatgaagtaaaattgacagtaatgataacaccacaggaggacaaagagtagtgcacggg 224

                              
Query: 305 aagacacggcagtaaaagt 323
           ||||||| |||||||||||
Sbjct: 223 aagacacagcagtaaaagt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space:   224196
Effective search space used:   224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no295_o22.g1 MSMg01no295_o22.g1 CHROMAT_FILE:
MSMg01no295_o22.g1 PHD_FILE: MSMg01no295_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:00 2005
         (292 letters)



>mm_chr17_79853828_79854519
          Length = 692

 Score =  545 bits (282), Expect = e-160
 Identities = 288/290 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctggcttcccacaaaggataggtcaaggagaggggacaggcttttgtgatgctgtgtaca 60
           |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 201 ctggcttcccacaaaggataggtcaaggagaggggacaggcttttgggatggtgtgtaca 260

                                                                       
Query: 61  ccacagctattctttctcaggcctaacccagtccactgaagtacatcagcctctgcagtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccacagctattctttctcaggcctaacccagtccactgaagtacatcagcctctgcagtg 320

                                                                       
Query: 121 ggaaggccctgagtttattttgctgtgtggcattaaatgctcagggtaattacacatgat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaggccctgagtttattttgctgtgtggcattaaatgctcagggtaattacacatgat 380

                                                                       
Query: 181 gcccgtctatcaggcaggacggggtcaaactctgcagccaacgcacagctgctgtgttcg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcccgtctatcaggcaggacggggtcaaactctgcagccaacgcacagctgctgtgttcg 440

                                                             
Query: 241 tgactacgtattaaatgtgcttttgctcacaattgtcaaagccgtattga 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgactacgtattaaatgtgcttttgctcacaattgtcaaagccgtattga 490


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space:   193289
Effective search space used:   193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information