Query= MSMg01no296_d21.b1 MSMg01no296_d21.b1 CHROMAT_FILE:
MSMg01no296_d21.b1 PHD_FILE: MSMg01no296_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:23 2005
(240 letters)
>mm_chr17_45563526_45564165
Length = 640
Score = 443 bits (229), Expect = e-129
Identities = 235/237 (99%), Gaps = 1/237 (0%)
Strand = Plus / Plus
Query: 5 gaattcattgtgaagttaaacttactcttcttcccctcttcacattacaatgtattttaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattgtgaagttaaacttactcttcttcccctcttcacattacaatgtattttaa 264
Query: 65 gtacgtaagattggtaatacttaaaaacctaatagactgaagtgcaaaatgcaatcatgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtacgtaagattggtaatacttaaaaacctaatagactgaagtgcaaaatgcaatcatgt 324
Query: 125 gacttctttaactagtatttatttgtttaatctttttttgttgtcatttggtttggtttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gacttctttaactagtatttatttgtttaatctttttttgttgtcatttggtttggtttt 384
Query: 185 tgttggtaactgtgttgttttcttttgggttttttttttttggggggggg-tggtgg 240
|||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 385 tgttggtaactgtgttgttttcttttgggtttttttttttgggggggggggtggtgg 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no296_d21.g1 MSMg01no296_d21.g1 CHROMAT_FILE:
MSMg01no296_d21.g1 PHD_FILE: MSMg01no296_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:23 2005
(105 letters)
>mm_chr17_45725662_45726166
Length = 505
Score = 197 bits (102), Expect = 1e-55
Identities = 102/102 (100%)
Strand = Plus / Minus
Query: 1 ttggatctcataagtaaaggtcttaattactaaaggaagtctggtagggcggtaggatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttggatctcataagtaaaggtcttaattactaaaggaagtctggtagggcggtaggatgg 243
Query: 61 gagtgggagggttgtgggcatgttgtgttaactggcagctgg 102
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gagtgggagggttgtgggcatgttgtgttaactggcagctgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 105
Length of database: 505
Length adjustment: 8
Effective length of query: 97
Effective length of database: 497
Effective search space: 48209
Effective search space used: 48209
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
