Query= MSMg01no302_g21.b1 MSMg01no302_g21.b1 CHROMAT_FILE:
MSMg01no302_g21.b1 PHD_FILE: MSMg01no302_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:04 2005
(321 letters)
>mm_chr17_71266068_71266788
Length = 721
Score = 557 bits (288), Expect = e-163
Identities = 310/322 (96%), Gaps = 8/322 (2%)
Strand = Plus / Minus
Query: 5 gaattccatcagtagctatagcaaaaaatcaaaatatactgtccagagctaaaatgattc 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 399 gaattccatcagtagctatagcaaaaaatcaaaatatactgtccagagctaaaacgattc 340
Query: 65 ccctattagctgaaggatccatgaacataatacagcactttgcattaccataaatactct 124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ctctattagctgaaggatccatgaacataatacagcactttgcattaccataaatactct 280
Query: 125 aaggagttctacatagtttttaaaaacctgttcctttgagttttcagttttaatctggaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aaggagttctacatagtttttaaaaacctgttcctttgagttttcagttttaatctggaa 220
Query: 185 tctttgtcatg--------tgtttccacaaatatcacgtactaaatcacggccatgtcat 236
||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 219 tctttgtcatgtgttgcactgtttccacaaatatcacatactaaatcacggccatgtcat 160
Query: 237 ctccattaaatgaaaggacatctccctttccctccacattcttcctttcaagtgcacaga 296
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 159 ctccattaaatgaaaggacatctctctttccctccacattcttcctttcaagtgcacaga 100
Query: 297 tctgcgtactgcctggactcta 318
||||||||||||||||||||||
Sbjct: 99 tctgcgtactgcctggactcta 78
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_g21.g1 MSMg01no302_g21.g1 CHROMAT_FILE:
MSMg01no302_g21.g1 PHD_FILE: MSMg01no302_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:04 2005
(292 letters)
>mm_chr17_71094190_71094881
Length = 692
Score = 445 bits (230), Expect = e-129
Identities = 279/306 (91%), Gaps = 21/306 (6%)
Strand = Plus / Plus
Query: 1 tgactaagcaaagtcattttgaaagtttgtgaggatccatccgggaggtgatggcacacg 60
||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||
Sbjct: 188 tgactaagcaaagtcattttgaaagtttgtgaggatc--t--gggagatgatggcacaca 243
Query: 61 cctttaatcccagcacttgggaggcagaggcaggtggatttctgagttcaaggcca-cct 119
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 244 cctttaatcccagcacttgggaggcagaggcaggcggatttctgagttcaaggccagcct 303
Query: 120 ggtctacaaagtgagttccaggacagccacggctacacagagaaaccctgtcttgaaa-- 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ggtctacaaagtgagttccaggacagccacggctacacagagaaaccctgtcttgaaaac 363
Query: 178 ----aaacaaacaaac----------aaagtttggagggggtgctagtctgagggctgaa 223
|||||||||||| |||||||| ||||||||||||||||| |||||||
Sbjct: 364 aaacaaacaaacaaacaacaacaaaaaaagtttgaagggggtgctagtctgaaggctgaa 423
Query: 224 ggtcagacaataataatctgagggcgaatggacagaaagatgctagtctgaggactcaag 283
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 424 ggtcagacaataataatctgagggcgaaaggacagaaagatgctagtctgaggactcaag 483
Query: 284 gttaga 289
||||||
Sbjct: 484 gttaga 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
