XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTT
CAACCCCCCCCTCTGGGTTTCTGTGAGCTAAACTGCCTCCTAGAGACGTA
GATCACTCAGCTTCGTCTTGTTTGAGGAGTCAAAGCGTCTCCTCTTATGG
AGACTAATGGTGTCCAATGGTCAGAAAGTCTCTGGCTTCCCAATTAGACC
AGATCCTGTGTGATGGCTCACATTTATTGTCAACTGAAATCATCACACTG
ACGGGTCCTCAGCGCCATCATCTATCTCGGTTTTGGCTCTGCGGAGCACC
TTAGCAGCACACGGCATGTCTGGACTTCCGCTGCCATGAGAGCACCTGGG
ACACACTCATCCCTGCCCCACATTCCCTGCACACACTGTCTGTCATCCCC
TCAGGGAGAACCCACCATCCTCGAGAGGAGAAAGGTGACACTTTAATACA
ACCACAAATGTCTAAGTCATGGAAAAGCACAGGCAAGACAGCCCCCCTTC
TACCCTAGGCTGCTGTTGCCCCAAATCACATGCTTTGGGTGGCATATTCT
TCCCAGGCGATTTCATGTTCCCAGGGGAGGAGCTGGGTCACAGAGACGGA
CAGTGTGCACAAGGTCAATCAGCAACATGGTAAAGATCCTTGGAATACTC
CACATTCGAGAAAGGCGGGCCTCATACTTCCTTGAGCTTAGCTCTGTGGT
CACGGCTTCTCTCTCTGGGAGCTCTCTCTCCCACT

CGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXTTGTCCGAATTCCTTCTTCTCAATTATCTGCCCCGTCCC
TTGTCATTGCTCCACTGATTTTACACCCGCAAAGGAAGGAAAAGGAATAA
TTGGGCTTTCTGGGTTGCTCTGCCAACCTTGTCTGCCCTGATGGAGAACT
CGTTGGTGAGGCAGAAGCTTCCTTGCACCCACCTTGGTCAGACCTCAGCA
TCACACATAGTCCTGGGTAAGGGAATAGAACACAAAATCAGAGTCAAGAG
GAATTGCACCCTCAGGAGATGCCTTTTTTTTTTGCCCCTCCTACATCCCA
AGGTCATCATTGGGTTTTTTTCTTTTCCCCCCCCCCCCCTAGGGAATTAC
TGTGGTTTTATTTGTATTCCCCCCCCCCAAAAAAAAAAAAAAAGTTTTTG
GCTGTCGCTCTGTGTATTTCTACATTTTTTGCTGTGCCGATTGTAAAGTT
TTCTTTTCTACTGTTCGACAACTTTTATTTCCCAATTTATTGGAAAATTT
ACGTTTTTTAAATTTGGTTGCCTTCCGTTACTTTTTCTTTTATTCGTGCT
TGATCTTCCTTTTCCCTTCGTTTCCACTTGATTTATTCCATGGTTTTTAT
CGTCGTGTTTCGACTGCCCGTTTTTACGGCTACATCCGTTTCTTCTATTC
GCACTTTACGACTTATATTTTATTCCATTTACTTTTTATATATATCTTAT
GCTTTCTTTATTTTTACCTTCTTTTTTTTTTTT

Query= MSMg01no307_c21.b1 MSMg01no307_c21.b1 CHROMAT_FILE:
MSMg01no307_c21.b1 PHD_FILE: MSMg01no307_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:09 2005
         (370 letters)



>mm_chr17_50023006_50023775
          Length = 770

 Score =  658 bits (340), Expect = 0.0
 Identities = 361/368 (98%)
 Strand = Plus / Minus

                                                                       
Query: 3   gaattctttcaacccccccctctgggtttctgtgagctaaactgcctcctagagacgtag 62
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gaattctttcaaccccccactctgggtttctgtgagctaaactgcctcctagagacgtag 511

                                                                       
Query: 63  atcactcagcttcgtcttgtttgaggagtcaaagcgtctcctcttatggagactaatggt 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 atcactcagcttcgtcttgtttgaggagtcaaagcgtctcctcttatggagactaatggt 451

                                                                       
Query: 123 gtccaatggtcagaaagtctctggcttcccaattagaccagatcctgtgtgatggctcac 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gtccaatggtcagaaagtctctggcttcccaattagaccagatcctgtgtgatggctcac 391

                                                                       
Query: 183 atttattgtcaactgaaatcatcacactgacgggtcctcagcgccatcatctatctcggt 242
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 atttattgtcaattgaaatcatcacactgacgggtcctcagcgccatcatctatctcggt 331

                                                                       
Query: 243 tttggctctgcggagcaccttagcagcacacggcatgtctggacttccgctgccatgaga 302
           || ||||||| |||| |||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 330 ttcggctctgtggagtaccttagcagcacatggcatgcctggacttccgctgccatgaga 271

                                                                       
Query: 303 gcacctgggacacactcatccctgccccacattccctgcacacactgtctgtcatcccct 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gcacctgggacacactcatccctgccccacattccctgcacacactgtctgtcatcccct 211

                   
Query: 363 cagggaga 370
           ||||||||
Sbjct: 210 cagggaga 203


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space:   274721
Effective search space used:   274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no307_c21.g1 MSMg01no307_c21.g1 CHROMAT_FILE:
MSMg01no307_c21.g1 PHD_FILE: MSMg01no307_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:09 2005
         (197 letters)



>mm_chr17_49855957_49856553
          Length = 597

 Score =  340 bits (176), Expect = 3e-98
 Identities = 191/196 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaaggaaggaaaaggaataattgggctttctgggttgctctgccaaccttgtctgccct 60
           ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 caaaggaaggaaaaggagtaattgggctttctgggttgctctgccagccttgtctgccct 260

                                                                       
Query: 61  gatggagaactcgttggtgaggcagaagcttccttgcacccaccttggtcagacctcagc 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 gatggagaactcgttggtgaggcagaagcttccttgcacccacctaggtcagacctcagc 320

                                                                       
Query: 121 atcacacatagtcctgggtaagggaatagaacacaaaatcagagtcaagaggaattgcac 180
           |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcacacagagtcctgggcaagggaatagaacacaaaatcagagtcaagaggaattgcac 380

                           
Query: 181 cctcaggagatgcctt 196
           ||||||||||||||||
Sbjct: 381 cctcaggagatgcctt 396


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 597
Length adjustment: 8
Effective length of query: 189
Effective length of database: 589
Effective search space:   111321
Effective search space used:   111321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)