Query= MSMg01no307_l21.b1 MSMg01no307_l21.b1 CHROMAT_FILE:
MSMg01no307_l21.b1 PHD_FILE: MSMg01no307_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:52 2005
(192 letters)
>mm_chr17_28773056_28773648
Length = 593
Score = 354 bits (183), Expect = e-102
Identities = 189/191 (98%), Gaps = 1/191 (0%)
Strand = Plus / Plus
Query: 1 atagactcgcccaggaggggaaaagcaggc-gcaacacctcttggcatctgggctgtcgg 59
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 atagactcgcccaggaggtgaaaagcaggcagcaacacctcttggcatctgggctgtcgg 260
Query: 60 ctgtaggcttctgtgcactctaagggtagggctcccctcagttagttctctctggagaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtaggcttctgtgcactctaagggtagggctcccctcagttagttctctctggagaag 320
Query: 120 ccccagaggcgcattcctagattctctcacgttgacaatcaacattgtgtaaccagggta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccccagaggcgcattcctagattctctcacgttgacaatcaacattgtgtaaccagggta 380
Query: 180 gcctacaacca 190
|||||||||||
Sbjct: 381 gcctacaacca 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 593
Length adjustment: 8
Effective length of query: 184
Effective length of database: 585
Effective search space: 107640
Effective search space used: 107640
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no307_l21.g1 MSMg01no307_l21.g1 CHROMAT_FILE:
MSMg01no307_l21.g1 PHD_FILE: MSMg01no307_l21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:52 2005
(283 letters)
>mm_chr17_28940303_28940985
Length = 683
Score = 528 bits (273), Expect = e-154
Identities = 282/287 (98%), Gaps = 4/287 (1%)
Strand = Plus / Minus
Query: 1 caggccaggcagggatacagagtgagaacctgttatc----taaataaataaataaataa 56
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 552 caggccaggcagggatacagagtgagaacctgttatctaaataaataaataaataaataa 493
Query: 57 ataaacaaaatcacagatctaaaacatctccagagacatctcatggctagaagccctatc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ataaacaaaatcacagatctaaaacatctccagagacatctcatggctagaagccctatc 433
Query: 117 tcttggccctgtccaaagtaaagacatctgaaatgcttcagactataaataatataatat 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tcttggccctgtccaaagtaaagacatctgaaatgcttcagactataaataatataatat 373
Query: 177 gctaggtacttccggcagaaggcagtacttaagataactgcaatactacttggggcattt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gctaggtacttccggcagaaggcagtacttaagataactgcaatactacttggggcattt 313
Query: 237 ccaaccacaaatcttgcaagctgggaatgcctctaagaaatctttta 283
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 312 ccaaccacaaaccttgcaagctgggaatgcctctaagaaatctttta 266
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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