Query= MSMg01no320_g17.b1 MSMg01no320_g17.b1 CHROMAT_FILE:
MSMg01no320_g17.b1 PHD_FILE: MSMg01no320_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:55 2005
(326 letters)
>mm_chr17_50014032_50014755
Length = 724
Score = 586 bits (303), Expect = e-172
Identities = 319/325 (98%), Gaps = 2/325 (0%)
Strand = Plus / Minus
Query: 1 tcattataaaaggaggctggtgagcttacacacacacaagactgaggaaaaatgagacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 523 tcattataaaaggaggctggtgagcttacacacacacaagactgaggaaaaataagacct 464
Query: 61 gggagaagaggcccgggggatcttcctgaagggggttgaggctgagctagctttgtgtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gggagaagaggcccgggggatcttcctgaagggggttgaggctgagctagctttgtgtac 404
Query: 121 ggaagggaaaaggacactggttctgaaaactcaaagctgacttctccttagtatttgtct 180
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 403 ggaagggaaaaggacactggttctgaaaactcaaagctgacctctccttagtatttgtcc 344
Query: 181 tttttttttcctagttagactacagactctcagaccttagctctgtgcccctaaacagac 240
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ttttttt--cctagttagactacagactctcagaccttagctctgtgcccctaaacagac 286
Query: 241 accagaatgccaggcaaattgccgagtagtcagtatggcagctggcccagcctgaatcaa 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 285 accagaatgccaggcaaattgctgagtagtcagtatggcagctggcccagcctgaatcaa 226
Query: 301 ccaggctatctggttttgcatctat 325
|||||||||||||||||||||||||
Sbjct: 225 ccaggctatctggttttgcatctat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 724
Length adjustment: 9
Effective length of query: 317
Effective length of database: 715
Effective search space: 226655
Effective search space used: 226655
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no320_g17.g1 MSMg01no320_g17.g1 CHROMAT_FILE:
MSMg01no320_g17.g1 PHD_FILE: MSMg01no320_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:56 2005
(318 letters)
>mm_chr17_49964080_49964795
Length = 716
Score = 565 bits (292), Expect = e-165
Identities = 311/318 (97%), Gaps = 2/318 (0%)
Strand = Plus / Plus
Query: 1 gagccccaggagcagggaggatgaatcacacagggttactaaggaaaaaaaaaagacaac 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 gagccccaggagcagggaggatgaatcacacagggttactaagg--aaaaaaaagacaac 258
Query: 61 tgaccttgagcactccgaccccttaacctcacccagcccaccagctctgcatcactgggc 120
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tggccttgagcacaccgaccccttaacctcacccagcccaccagctctgcatcactgggc 318
Query: 121 catgtgggatggccctgcatgtgggacttgctgcctctaagagtcaggaacccatttgat 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 catgtgggatagccctgcatgtgggacttgctgcctctaagagtcaggaacccatttgat 378
Query: 181 ttatttaaatgtggtgccaccattgggtgggtctcctaaggtttatgtggctttccactt 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 379 ttatttaaatgtggtgccaccattgggtgggtctcctaaagtttatgtggctttccactt 438
Query: 241 cacattttccttttgctctcctcccaagagcccttgccaagcctgctgtgcctcagcctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cacattttccttttgctctcctcccaagagcccttgccaagcctgctgtgcctcagcctg 498
Query: 301 gtccaagccagcaccgag 318
||||||| ||||||||||
Sbjct: 499 gtccaagacagcaccgag 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 716
Length adjustment: 9
Effective length of query: 309
Effective length of database: 707
Effective search space: 218463
Effective search space used: 218463
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
