Query= MSMg01no321_d06.b1 MSMg01no321_d06.b1 CHROMAT_FILE:
MSMg01no321_d06.b1 PHD_FILE: MSMg01no321_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:53 2005
(322 letters)
>mm_chr17_80287298_80288019
Length = 722
Score = 576 bits (298), Expect = e-169
Identities = 316/326 (96%), Gaps = 8/326 (2%)
Strand = Plus / Minus
Query: 1 attcttagccta----tccccttaaagttagccatcactgacctctttggggacagagat 56
|||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 539 attcttagcctacagtt----ttaaagttagccatcactgacctctttggggacagagat 484
Query: 57 gttcttatttctaggatgtcttcattgacaacctgattttaagtacaaaatagtgctacc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gttcttatttctaggatgtcttcattgacaacctgattttaagtacaaaatagtgctacc 424
Query: 117 accaggtccagaagcttaatttaagtggtttttaaaaaaatcttaaaatgcatctgatac 176
||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 423 accaggtccagaagcttaatttaagtggttttttaaaaaattttaaaatgcatctgatac 364
Query: 177 tcaagtatattgtttaaagaactgatcatggcagttttggaaaaaataatttgcatctac 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tcaagtatattgtttaaagaactgatcatggcagttttggaaaaaataatttgcatctac 304
Query: 237 acataatatattttacattacatttttccctcatctagttccataaaatgcataaaagga 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 acataatatattttacattacatttttccctcatctagttccataaaatgcataaaagga 244
Query: 297 ttttatgccatagtgttctttaagtg 322
||||||||||||||||||||||||||
Sbjct: 243 ttttatgccatagtgttctttaagtg 218
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_d06.g1 MSMg01no321_d06.g1 CHROMAT_FILE:
MSMg01no321_d06.g1 PHD_FILE: MSMg01no321_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:53 2005
(245 letters)
>mm_chr17_80146973_80147617
Length = 645
Score = 427 bits (221), Expect = e-124
Identities = 239/249 (95%), Gaps = 8/249 (3%)
Strand = Plus / Plus
Query: 1 catgaactaaactgtactcgctgcacaaactgaacagactgttatgcccc----tgcaca 56
||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 201 catgaactaaactgtactcgctgcacaaactgaacagactgggatg----ggattgcaca 256
Query: 57 cactccgctgaattcaactgcattcaactgaactgcaccaaactcctatgagctggactc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cactccgctgaattcaactgcattcaactgaactgcaccaaactcctatgagctggactc 316
Query: 117 aaccgacctgctttcattggacctgtcttccctcctgacttaatctgtgcagtgtttaca 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aaccgacctgctttcattggacctgtcttccctcctgacttaatctgtgcagtgtttaca 376
Query: 177 tcacctctctttcctgcctgtatttcatgagagtcagatcttcctctgatttgcactttg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tcacctctctttcctgcctgtatttcatgagagtcagatcttcctctgatttgcactttg 436
Query: 237 tatgctcct 245
|||||||||
Sbjct: 437 tatgctcct 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
