Query= MSMg01no322_i24.b1 MSMg01no322_i24.b1 CHROMAT_FILE:
MSMg01no322_i24.b1 PHD_FILE: MSMg01no322_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:33 2005
(353 letters)
>mm_chr17_85648237_85648989
Length = 753
Score = 576 bits (298), Expect = e-169
Identities = 340/354 (96%), Gaps = 2/354 (0%)
Strand = Plus / Plus
Query: 1 taaatgccctgaccggcagctgactgctaccacagctatgctggtaagggtttgggaagt 60
|||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 taaatgtcctgaccggcagctgactgctaccacagctatgctggtatgggtttgggaagc 260
Query: 61 gtcatgggggtgagaaagacagctgactttgtatttggagtttttccagggcctgtgctg 120
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 gtcaagggggtgagaaagacagctgactttgtatttggagtttttccaggggctgtgctg 320
Query: 121 ttatcgttcacatgagccattattttggttccagtgctctgtctctcttcctacaggatt 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 321 ttatcgttcacatgagccattattttggttccagtgctctgtctgtcttcctataggatt 380
Query: 181 ttcccctgagtagattgattgatgtaaaataaaacagtaacatggcgggaccctttacca 240
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 ttcccctgagtagactgattgatgtaaaataaaacagtaacatggtgggaccctttacca 440
Query: 241 aaactctgactctcttattccagatagcccatgtcatagcagttttgagaaccattggat 300
|||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 441 aaactctgactctcttatcccaggtagcccatgtcatagcacttttgagaaccattggat 500
Query: 301 tttatgaggccatctgtccttatatttc-tgctatcattgtaggttcttttaat 353
|||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 501 tttatgaggccatctgtccttatatttcct-ctatcattgtaggttcttttaat 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_i24.g1 MSMg01no322_i24.g1 CHROMAT_FILE:
MSMg01no322_i24.g1 PHD_FILE: MSMg01no322_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:33 2005
(298 letters)
>mm_chr17_85811148_85811845
Length = 698
Score = 547 bits (283), Expect = e-160
Identities = 292/295 (98%)
Strand = Plus / Minus
Query: 1 tggagatcaaattcaggtcctggtgcttaagggtgaatagtttatgaatgagttatttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tggagatcaaattcaggtcctggtgcttaagggtgaatagtttatgaatgagttatttct 436
Query: 61 gctgcctagatctagctttaatgaatggaagccttcagagctgtgaagcactgcagaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gctgcctagatctagctttaatgaatggaagccttcagagctgtgaagcactgcagaacc 376
Query: 121 taacaagaagctcaaagagaagcttcattcctggggtcctcgggaggtttccagagtagc 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 taacaagaagctcagagagaagcttcattcctggggtcctcgggaggtttccagagtagc 316
Query: 181 tgaagaactatctgtcactcggggtgtgtggcccagaaagctctaagactggctctggtc 240
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 315 tgaagagctatctgtcactcggggtgtgtggcccagaaagctctaagaatggctctggtc 256
Query: 241 ccaaagtttggtatcttattccaacttaatgcttaaacatttctggactgattta 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ccaaagtttggtatcttattccaacttaatgcttaaacatttctggactgattta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
