Query= MSMg01no323_m11.b1 MSMg01no323_m11.b1 CHROMAT_FILE:
MSMg01no323_m11.b1 PHD_FILE: MSMg01no323_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:07:43 2005
(593 letters)
>mm_chr17_62895057_62896050
Length = 994
Score = 1021 bits (528), Expect = 0.0
Identities = 543/548 (99%), Gaps = 1/548 (0%)
Strand = Plus / Minus
Query: 11 gaattcatattcttccctctac-cttagaattttccaatagaggtaactttgtacttagc 69
|||||||||||||||||||||| || || |||||||||||||||||||||||||||||||
Sbjct: 548 gaattcatattcttccctctacactcagtattttccaatagaggtaactttgtacttagc 489
Query: 70 cctttaacaaatccaattttttaattaaaagattgatatgtaacttagtttttgaatcaa 129
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 catttaacaaatccaattttttaattaaaagattgatatgtaacttagtttttgaatcaa 429
Query: 130 tgagcaaagatatccataaccaacaatgatatacataacatttggagaatcataaaaagc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgagcaaagatatccataaccaacaatgatatacataacatttggagaatcataaaaagc 369
Query: 190 ccttagtagatttttttaaagctgatttcaattgatctgttcttagtacagagctgagcc 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ccttagtagatttttttaaagctgatttcaattgatctgttcttagtacagagctgagcc 309
Query: 250 ttggagacaatctgcagctatgtttacaatctcatggccattagatggtttaaatttctt 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttggagacaatctgcagctatgtttacaatctcatggccattagatggtttaaatttctt 249
Query: 310 tttagctggttaactcagagctactcacatgttaagctttttgttttgttctgttttgtt 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttagctggttaactcagagctactcacatgttaagctttttgttttgttctgttttgtt 189
Query: 370 tagttgttgttgttgttgttttcttttaggagtcagcctccatcacatcttttgaaagct 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tagttgttgttgttgttgttttcttttaggagtcagcctccatcacatcttttgaaagct 129
Query: 430 actgtgggtagatactgagcatgcacaaaagtggagaggtatttaaatgggatcaattta 489
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 attgtgggtagatactgagcatgcacaaaagtggagaggtatttaaatgggatcaattta 69
Query: 490 ctttttaaaacaaggttgcaaaaaccgattcttattctcaatgaaatctaagtaagggag 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ctttttaaaacaaggttgcaaaaaccgattcttattctcaatgaaatctaagtaagggag 9
Query: 550 atgataaa 557
||||||||
Sbjct: 8 atgataaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 994
Length adjustment: 10
Effective length of query: 583
Effective length of database: 984
Effective search space: 573672
Effective search space used: 573672
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no323_m11.g1 MSMg01no323_m11.g1 CHROMAT_FILE:
MSMg01no323_m11.g1 PHD_FILE: MSMg01no323_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:07:43 2005
(606 letters)
>mm_chr17_62846887_62847892
Length = 1006
Score = 1141 bits (590), Expect = 0.0
Identities = 602/606 (99%)
Strand = Plus / Plus
Query: 1 tggggtcgtatgatttcaaaggtttagagtccatgaccatcatggtggggtacatgacag 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggggtggtatgatttcaaaggtttagagtccatgaccatcatggtggggtacatgacag 260
Query: 61 caggcagacatggtgctaaagaggtagctaagggatacttctgattcacaagcatgaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggcagacatggtgctaaagaggtagctaagggatacttctgattcacaagcatgaggt 320
Query: 121 agagcagatgagatgggccctggcatgggtttctgaaacccccaaactcacccccagtaa 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagcagatgagatggggcctggcatgggtttctgaaacccccaaactcacccccagtaa 380
Query: 181 cacacctcctccaacaaggccacacctcctagtccttgccaaacagttccaccaactggc 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 cacacctcctccaacaaggccacacctcctagtccttgccacacagttccaccaactggc 440
Query: 241 aaccaagcatcaaaatataggagtctatgatgggggcagagcatccacattctaacaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaccaagcatcaaaatataggagtctatgatgggggcagagcatccacattctaacaatt 500
Query: 301 atacctgctacaggtccccaacatgaagccaagccacaactgactgaaaccttaaaatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atacctgctacaggtccccaacatgaagccaagccacaactgactgaaaccttaaaatgg 560
Query: 361 aatcaaagtaaatctaccatgccatgagttgttcctcttaggcatttttaacacagccgc 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatcaaagtgaatctaccatgccatgagttgttcctcttaggcatttttaacacagccgc 620
Query: 421 aataggttaacccttccctccagtcccatggacaccagattgtaaatactactatccttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aataggttaacccttccctccagtcccatggacaccagattgtaaatactactatccttt 680
Query: 481 tatttcccctagactgctcaatggtatatgtgttttggagatttaatttatttccatcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatttcccctagactgctcaatggtatatgtgttttggagatttaatttatttccatcat 740
Query: 541 ataaggagatttgtaatgaaaatgaactttattttggacagatatgttagagatggatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ataaggagatttgtaatgaaaatgaactttattttggacagatatgttagagatggatga 800
Query: 601 attgtg 606
||||||
Sbjct: 801 attgtg 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
