Query= MSMg01no323_m14.b1 MSMg01no323_m14.b1 CHROMAT_FILE:
MSMg01no323_m14.b1 PHD_FILE: MSMg01no323_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:07:44 2005
(765 letters)
>mm_chr17_9439540_9440704
Length = 1165
Score = 1440 bits (745), Expect = 0.0
Identities = 760/765 (99%)
Strand = Plus / Plus
Query: 1 tgttagatcttactgaattattttcattaaaacacgagagcattggttctcatttttatc 60
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 201 tgttagatcttactgaattattttcattaaaaaatgagagcattggttctcatttttatc 260
Query: 61 agaaatatttgaaattttctttgccacatgcacccactaggaaaagtttaaatcgtatac 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 agaaatatttgaaattttctttgccacatgtacccactaggaaaagtttaaatcgtatac 320
Query: 121 atgtagagtcttacagatacagagtggctgattgctacttctttacatttatctgactac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtagagtcttacagatacagagtggctgattgctacttctttacatttatctgactac 380
Query: 181 aagtgaatttgaacattttgtagatttatgattctcgtatttgtgcttgggttaaccact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtgaatttgaacattttgtagatttatgattctcgtatttgtgcttgggttaaccact 440
Query: 241 gcacttcaattttgttgttttattcttccttattgagaatttatagccacccttgtacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcacttcaattttgttgttttattcttccttattgagaatttatagccacccttgtacat 500
Query: 301 tgcacctcctatgatattgccatctatataatcatttttctagctcactcttttggtatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 tgcacctcctatgatattgccatctatataatcatttttctagctcactctcttggtatc 560
Query: 361 tttcatagtaactttaacctatttttttcctttaaatatttctggtcttcaagctgtggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttcatagtaactttaacctatttttttcctttaaatatttctggtcttcaagctgtggt 620
Query: 421 taaaataggaatatctttgactcttatttttagtatgctgatatttctgtaatcattaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taaaataggaatatctttgactcttatttttagtatgctgatatttctgtaatcattaat 680
Query: 481 tctttaatctttcaacatattgagcaaccttaatccatctaaaaactactttagtgtata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctttaatctttcaacatattgagcaaccttaatccatctaaaaactactttagtgtata 740
Query: 541 tgtaaggttcgtgtgagagtggagtttgtgtttgagatagacaggcagctactgcagtgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtaaggttcgtgtgagagtggagtttgtgtttgagatagacaggcagctactgcagtgt 800
Query: 601 ctttcattaaacaacccgttgatttatggttacattatgctaatgcctgattctacatac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctttcattaaacaacccgttgatttatggttacattatgctaatgcctgattctacatac 860
Query: 661 tgtcacccactctgtttccctgatttatttctttaatttcatgtttcagtgcagttggtt 720
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tgtcacccactctgttttcctgatttatttctttaatttcatgtttcagtgcagttggtt 920
Query: 721 aactcagtctgaattgctagcactcctgaatgccagtgtctgctg 765
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 aactcagtctgaattgctagcactcctgaatgccagtgtctgctg 965
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 765
Length of database: 1165
Length adjustment: 10
Effective length of query: 755
Effective length of database: 1155
Effective search space: 872025
Effective search space used: 872025
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no323_m14.g1 MSMg01no323_m14.g1 CHROMAT_FILE:
MSMg01no323_m14.g1 PHD_FILE: MSMg01no323_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:07:44 2005
(710 letters)
>mm_chr17_9615007_9616116
Length = 1110
Score = 866 bits (448), Expect = 0.0
Identities = 459/463 (99%)
Strand = Plus / Minus
Query: 248 tgtctactggactcctgctgtctctgactctcgtagagtcattaacattgccagggagaa 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1110 tgtctactggactcctgctgtctctgactctcgtagagtcattaacattgccagggagaa 1051
Query: 308 tatttcctgaaggaggaacatgatttaatcatgttccacctacaagatctacacttatgg 367
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1050 tatttcctgaaggaggaacatgaagtaatcatgttccacctacaagatctacacttatgg 991
Query: 368 aggcccacactctgttgggcctgttccaggggcatgaatcatttcatgccatccccacca 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990 aggcccacactctgttgggcctgttccaggggcatgaatcatttcatgccatccccacca 931
Query: 428 tagcctcgtcaggcttggcaggctatggctctcaatgaatccattctttgtgggacatgc 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 tagcctcgtcaggcttggcaggctatggctctcaatgaatccattctttgtgggacatgc 871
Query: 488 tgggaggacacacacagcaaaccacgagagcacttgagagtattaatatgtgcagtcttg 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 tgggaggacacacacagcaaaccacgagagcacttgagagtattaatatgtgcagtcttg 811
Query: 548 caagccgagaaatgaaagcttgaaaatcatttaatttaaaagggtggnggatcaggatca 607
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 810 caagccgagaaatgaaagcttgaaaatcatttaatttaaaagggtgggggatcaggatca 751
Query: 608 cagataagggttctttgataattcacaatgactttgaacatgggagccatgtgaaggaaa 667
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 750 cagataagggttctttgataattcacaatgactttgaacatgggagccgtgtgaaggaaa 691
Query: 668 taaggactatctacaacagttccatgtcttcctgctgtaacag 710
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 taaggactatctacaacagttccatgtcttcctgctgtaacag 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 710
Length of database: 1110
Length adjustment: 10
Effective length of query: 700
Effective length of database: 1100
Effective search space: 770000
Effective search space used: 770000
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
