CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTAAAGTTACCACAAGGAAAAGCCAAGGTGTGTTTTCCTTCTTGATT
TACACTGAAGGTTTTCTTTCTTTACAAGTATTGATCATTATAGTAGTGAC
TAGAAATGCTCATTAGCTAAGCTCAGCAAGCAGGTTGCCTCACACGTTTT
AAATACAAACCATATAGGTTTTAAAAAAAACTTTGTTTGAAACTCTGTAC
AATGAACATCTTATGATCACTTCACAGAATAAACATGTTTATCTTAAACT
GTGTGTATCCCAGTAGCGCTGGTCTGCAAGAGGCAGGTGATCTGACCGAT
TCTTTCTATTGAGGGTAAACTCCCACCCCTTGACCTACTCAAACCCTGTT
ATAATGTTAGAGGTACTTGTGGGACCTCAGGGACTTCTGCTGTTGGGGTG
GGAAACAAGACACTGGTCACCACTTTTTATTTGTATTGAAACCTCCTGTC
AGAGAAGGTGCTGTAGTGCATCTGAGCTCTGTTGTCTTTACAGCCTCTGC
ACTCAGGGAGAAATGCTTTCCAATGCTGGCCGGCCGGCTGGGCTTTGCCC
AGCAGTAAAGCTAATATTCTAATGTAGTAATAATTTATTAGATTTTTTTC
TTTATTTCATTACATCACATATTTTTTTATGTATGTAGTTACCTTTAAGA
TCCTACCTTCAGGGACATGGTCCGGGACTATTGCTGTTG

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATTGTCTCTGGTGAGAAGTCTGGTG
TAATTCTGATAGGTCTTCCTTTATATGTAACTTGACATTTTTCCCTTACT
GCTTTTAATATTCTTTCTTTGTTTAGTGAGTTTGGTGTTTTGATTATTAA
GTGATGGGAGACATTTCTTTTCTGATCTTATCTATNTTGGAGTTCTGTAG
GCTTCTTGTATGTTCATGGGCATCACTTTCTTTAGGTTGGGGAAAAGTTT
TCTTCTATAATTTTGTTGAAGATATTTACTGGCCCTTTATGTTGACAATC
TTCACTCTCTTCTATACCTAACATCCTTAGGTTTGGTCTTCTCATTGTGT
CCTGGATTTCCTGCATGCTTTTGGGGTTAGGCAACCTTTTTTGCCCTTTT
TGGAAATGTTTTTTCTTAACTGGTGGGGGCCCGGGTTTTTCAAGGAAATC
CTTTCGAGACCGGAAAATCTCCCCTTCTCACCCCCTGGGATTCCGGGGGG
GGGGAAGGCCCTGGGGCCCCTCAAAAGAAATTTCCGCAATTTCTTTTTTT
TTCCCCCCACGGATGTTTTTTTTTCTGTTTCTTCCCCCAACAAACACCCC
CCCCCCCCCCCCTGGTGGTGTGTGCCCCTTTTTCTCCCGGTGGGGCGGCG
GCCTTCTTTTCCTCTTTCTCGCGGCCATACCCTCCCATATCAATCTCCAT
GTGCTCG

Query= MSMg01no324_i02.b1 MSMg01no324_i02.b1 CHROMAT_FILE:
MSMg01no324_i02.b1 PHD_FILE: MSMg01no324_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:50 2005
         (695 letters)



>mm_chr17_79074535_79075628
          Length = 1094

 Score = 1313 bits (679), Expect = 0.0
 Identities = 688/691 (99%), Gaps = 1/691 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctaaagttaccacaaggaaaagccaaggtgtgttttccttcttgatttacactga 64
           |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 gaattctaaagtta-caaaaggaaaagccaaggtgtgttttccttcttgatttacactga 836

                                                                       
Query: 65  aggttttctttctttacaagtattgatcattatagtagtgactagaaatgctcattagct 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 aggttttctttctttacaagtattgatcattatagtagtgactagaaatgctcattagct 776

                                                                       
Query: 125 aagctcagcaagcaggttgcctcacacgttttaaatacaaaccatataggttttaaaaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 aagctcagcaagcaggttgcctcacacgttttaaatacaaaccatataggttttaaaaaa 716

                                                                       
Query: 185 aactttgtttgaaactctgtacaatgaacatcttatgatcacttcacagaataaacatgt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aactttgtttgaaactctgtacaatgaacatcttatgatcacttcacagaataaacatgt 656

                                                                       
Query: 245 ttatcttaaactgtgtgtatcccagtagcgctggtctgcaagaggcaggtgatctgaccg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ttatcttaaactgtgtgtatcccagtagcgctggtctgcaagaggcaggtgatctgaccg 596

                                                                       
Query: 305 attctttctattgagggtaaactcccaccccttgacctactcaaaccctgttataatgtt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 attctttctattgagggtaaactcccaccccttgacctactcaaaccctgttataatgtt 536

                                                                       
Query: 365 agaggtacttgtgggacctcagggacttctgctgttggggtgggaaacaagacactggtc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 agaggtacttgtgggacctcagggacttctgctgttggggtgggaaacaagacactggtc 476

                                                                       
Query: 425 accactttttatttgtattgaaacctcctgtcagagaaggtgctgtagtgcatctgagct 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 accactttttatttgtattgaaacctcctgtcagagaaggtgctgtagtgcatctgagct 416

                                                                       
Query: 485 ctgttgtctttacagcctctgcactcagggagaaatgctttccaatgctggccggccggc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ctgttgtctttacagcctctgcactcagggagaaatgctttccaatgctggccggccggc 356

                                                                       
Query: 545 tgggctttgcccagcagtaaagctaatattctaatgtagtaataatttattagatttttt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tgggctttgcccagcagtaaagctaatattctaatgtagtaataatttattagatttttt 296

                                                                       
Query: 605 tctttatttcattacatcacatatttttttatgtatgtagttacctttaagatcctacct 664
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tctttatttcattaaatcacatatttttttatgtatgtagttacctttaagatcctacct 236

                                          
Query: 665 tcagggacatggtccgggactattgctgttg 695
           |||||||||||||||||||||||||||||||
Sbjct: 235 tcagggacatggtccgggactattgctgttg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1094
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1084
Effective search space:   742540
Effective search space used:   742540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)