Query= MSMg01no326_o19.b1 MSMg01no326_o19.b1 CHROMAT_FILE:
MSMg01no326_o19.b1 PHD_FILE: MSMg01no326_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:43 2005
(629 letters)
>mm_chr17_66730119_66731147
Length = 1029
Score = 1147 bits (593), Expect = 0.0
Identities = 620/629 (98%)
Strand = Plus / Minus
Query: 1 tcagattttcaaacacttagcttctttctctggtgtctgtttaatttcctgctgtgtcac 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 829 tcagattttcaaacacttagcttctttctctggtctctgtttaatttcctgctgtgtcac 770
Query: 61 agcaaccaaaacagaggaccagaacaaaaggctccaaagtggctctagcccggcaaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 agcaaccaaaacagaggaccagaacaaaaggctccaaagtggctctagcccggcaaggag 710
Query: 121 cccagatgtcttcacttgtactaagcaaaatgtcctagatgtcagggtgtgttctcatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 cccagatgtcttcacttgtactaagcaaaatgtcctagatgtcagggtgtgttctcatgt 650
Query: 181 ggcacctcagcttggaaagctctgagatgccgactacggcctctgtcttcatgtcatttg 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ggcacttcagcttggaaagctctgagatgccgactacggcctctgtcttcatgtcatttg 590
Query: 241 gggagccttgaggaaggacacatgccaagtggaaagatgaattgccccgtctcatgcccc 300
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 589 gggagccttgaggaaggacacatgccaagtggaaagatggattaccccgtctcatgcccc 530
Query: 301 tcagctagtcagtggaaaagtgaggctctaacttattattattacaccagttgttcaacc 360
|||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||
Sbjct: 529 tcagctagtcagtggaaaagcgaggctctaacttattattattataagagttgttcaacc 470
Query: 361 tcattgacctggtggaaccttctggattttcagacatctgagggacatttacagtggcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tcattgacctggtggaaccttctggattttcagacatctgagggacatttacagtggcca 410
Query: 421 ccagatagatgtagtccctgaatcctgttagctttaccgtcaggttttgatgaaggactt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ccagatagatgtagtccctgaatcctgttagctttaccgtcaggttttgatgaaggactt 350
Query: 481 tggtgacttgctcagagtgctgctgatgtgccaggctggatctgcaaagtcaccactggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tggtgacttgctcagagtgctgctgatgtgccaggctggatctgcaaagtcaccactggc 290
Query: 541 caccatgttgcgaatggatcttagacttcattcactttccccttcttcatccttcttcat 600
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 caccatgttgcaaatggatcttagacttcattcactttccccttcttcatccttcttcat 230
Query: 601 ttataacttgtgtgctggtttctgtgttg 629
|||||||||||||||||||||||||||||
Sbjct: 229 ttataacttgtgtgctggtttctgtgttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_o19.g1 MSMg01no326_o19.g1 CHROMAT_FILE:
MSMg01no326_o19.g1 PHD_FILE: MSMg01no326_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:43 2005
(385 letters)
>mm_chr17_66561011_66561796
Length = 786
Score = 708 bits (366), Expect = 0.0
Identities = 381/386 (98%), Gaps = 1/386 (0%)
Strand = Plus / Plus
Query: 1 acaggtccggggg-aaaaaaatcccaacacatggactagaaattaaaccaaagtaggtat 59
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaggtccgggggaaaaaaaatcccaacacatggactagaaattaaaccaaagtaggtat 260
Query: 60 ataggagtcctttggttgcaacaaaagaaaaaggaccaaaaaaccaataacaaataaaac 119
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 ataggagtcctttggttgcaacaaaagaaaaaggaagaaaaaaccaataacaaataaaac 320
Query: 120 cagcaccctgcactatagggacaataccccaaccagagcacagatttatacacacggtgt 179
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 cagcaccctgcactatagggacaataccccaaccaaagcacagatttatacacacggtgt 380
Query: 180 ttccttttcacttacagttccctcacaaatgttacatgtgaacaggaagcgagagtatcc 239
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctttttcacttacagttccctcacaaatgttacatgtgaacaggaagcgagagtatcc 440
Query: 240 ctcccaccacatctgcactgtggctgtctttacttttgccttcagggactttttcctccc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcccaccacatctgcactgtggctgtctttacttttgccttcagggactttttcctccc 500
Query: 300 tagtgataatgccaagcatgtatgtagggggctaaatgaggtttgtccacagagggaggg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagtgataatgccaagcatgtatgtagggggctaaatgaggtttgtccacagagggaggg 560
Query: 360 tcatgtgctttaacgccttgtcctct 385
||||||||||||||||||||||||||
Sbjct: 561 tcatgtgctttaacgccttgtcctct 586
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 786
Length adjustment: 9
Effective length of query: 376
Effective length of database: 777
Effective search space: 292152
Effective search space used: 292152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
