Query= MSMg01no327_a14.b1 MSMg01no327_a14.b1 CHROMAT_FILE:
MSMg01no327_a14.b1 PHD_FILE: MSMg01no327_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:51 2005
(375 letters)
>mm_chr17_64400845_64401618
Length = 774
Score = 648 bits (335), Expect = 0.0
Identities = 362/371 (97%), Gaps = 1/371 (0%)
Strand = Plus / Plus
Query: 4 ggaattccactatttatgactaagaatgccagaaattatattcttctgatcttgcagttt 63
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccactatttatgagtaagaataccagaaattatattcttctgatcttgcagttt 263
Query: 64 ttcctttgatcagaggtctttcaccccaggttatgtgattgtggagtaaggatttttttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 264 ttcctttgatcagaggtctttcaccccaggttatgtgattgtggagtaaggatatttttg 323
Query: 124 tttttaaagaaaactatagtcctttggggactcaatccctctcaaaacaccgtagggtcc 183
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 324 tttttaaagaaaactatagtcctttggggactcaatccctctcaaaacaccggagggtcc 383
Query: 184 tcagctttcaccactgacactctgaagtcctcggagcacttgagatgcactcatactgtc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcagctttcaccactgacactctgaagtcctcggagcacttgagatgcactcatactgtc 443
Query: 244 actcacaacgtggtgcactgtgggtgagtgttgcctgtgtaaacgtggctgctctgactt 303
||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 444 actcagaacgtggtgcactgtgggtgagtgttgcctgtggaaacgtggctgctctgactt 503
Query: 304 ggagctgcacatggctcgtagttcccactttactgctcacagcgtaccactttgtaagta 363
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 504 ggagctgcacatggctcgtagttcccactttactgctcacagtgtaccactttgtaagta 563
Query: 364 aactgaaatga 374
||| |||||||
Sbjct: 564 aac-gaaatga 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 774
Length adjustment: 9
Effective length of query: 366
Effective length of database: 765
Effective search space: 279990
Effective search space used: 279990
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_a14.g1 MSMg01no327_a14.g1 CHROMAT_FILE:
MSMg01no327_a14.g1 PHD_FILE: MSMg01no327_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:51 2005
(532 letters)
>mm_chr17_64541601_64542538
Length = 938
Score = 905 bits (468), Expect = 0.0
Identities = 518/542 (95%), Gaps = 14/542 (2%)
Strand = Plus / Minus
Query: 1 ctaagaggtgtctggagcattcgctgtctaattttctcttctccatagataaccactttc 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 922 ctaagagatgtctggagcattcgctgtctaattttctcttctccatagataactactttc 863
Query: 61 cagcatgtgtcaccataaatgacactgcatgctgaagaacagtactccatctttgaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 cagcatgtgtcaccataaatgacactgcatgctgaagaacagtactccatctttgaagca 803
Query: 121 tttatgtcttctttctttctttttttatttttatttttaatttttgtagttattatcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tttatgtcttctttctttctttttttatttttatttttaatttttgtagttattatcttt 743
Query: 181 tattgggggagggttcatcaatccttcttggccatcgccttcctcatggctgccagtacg 240
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 742 tattgggggagggttcatcaatccttcttggccaccgccttcctcatggcttccagtacg 683
Query: 241 ttgcttggctcctccccctttctcttggcacggatgtg------cgtgtccacctgtgag 294
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 682 ttgcttggctcctccccctttctcttggcacggatgtggatgtgcgtgcccacctgtgag 623
Query: 295 gaggagtagcctgtcacccacggccattgccgccagctacacccccacccgcccccgc-- 352
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 622 gaggagtagcctgtcacccacggccattgccgccagccacacccccacccgt----gctc 567
Query: 353 --cgcagcacgctgcctactctcttcttgatgaacttgggtgcacacttgtccttcgaca 410
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 566 aacgcagcacgctgcctactctcttcttgatgaacttgggtgcacgcttgtcctttgaca 507
Query: 411 ctttgagcaacaccatggcacaccgctcttagggtgtgcgcgaggctgcacacctcccgg 470
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ctttgagcaacgccatggcacaccgctcttagggtgtgcgcgaggctgcacacctcccgg 447
Query: 471 atcatgtctcgcatgaacttggtgtgtgcttggtgaggtgtccgtggtgctggctgtgtc 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 atcatgtctcgcatgaacttggtgtgtgcttggtgaggtgtccgtggtgctggctgtgtc 387
Query: 531 tc 532
||
Sbjct: 386 tc 385
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 938
Length adjustment: 10
Effective length of query: 522
Effective length of database: 928
Effective search space: 484416
Effective search space used: 484416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
