ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTACCAGTTACCTTCTCCAGTTGAAAAACAACTTTGGCAAAGTGGC
GGGATATAAAATTAACTCAAATAAATCATTAGCCTTCCTTTATACAAAGG
ATAAACAGGCTGAGAAAGAAATTAGGGAAATAACTCCCTTCACTATAGCC
TCAAATAATATAGAGTATCTTGGTGTGACTCTAACCAAACAAGCGAAAAC
CTGGATGACAATAATTTCAAGTCTATCAAGAAATAAATCTAAGAAGATCT
CAGAAAATGTAGAGTTCTCCCATGCTTTTGGATTGGCAGATTTAACAGAG
TAAAAATGGCCATCCTACCAAAGGCAATCTATAGATTCATTGTGATTCCC
ATCAAAGTTCCAACACAACTCTTCAAAGACATGGAAAGAACAATTCTCAG
ATTCATCTGGAAAGGTAAAAAAACTCAGAATAGCAAAACAATTCTTTTCT
TTTTTTCTTTTTTATTGATTAATATAATAAAAATGGTTATCTTGCCAAAA
TCAATCTATAAATTCAATGCAATCCCCTTCAAAATTCCAACTTCAATTCT
TCACAGAGTTACAAAGGGCAATATGCAAATTCACCTGGAATAACAAAACT
TAGAATAGCAAAAACTCTTCTCAACTATTAAAGATCCTCTGGTGGAATCA
CCATCCTTGACCTCAAGCTGTACTACAAA

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATTGGAAAATGTAATCACATTTAAAT
TTTGATTAACTGGAAGCTTAAAAAAAATAGATCAACTTAGGAAAAGTTCA
TTTTGAATCCAGTGTCCTCATTTTGATAGATTGGTTTTTGTTATATTTAT
GTAAATTTCATCAATTGAGAGTTCAAAGTCAGGTGGATTATTGATTGTTA
GAGCTCATAAGGAGACAGGGGATGTTGAAGATTTGGAGAGAAAAACTATT
AAGATTTTCTAACAGAATAAATATGTTAATTAGATATTGAAAATACTGGG
TCACAGGCTAAGGGTAAGTCCTTAACTTTCACTGGTCAAAAAATCTTTAT
AGACACACTTTAGTTTCCATACAACTCTGAGGATATCATCTAGCTTCTTG
TTGACAACATAGAAAAAGAATAATAATTGATAATTATTTTATAGCAAGCT
GTATTTTAATTGGTGCTAATTTATAAATATTTGATGCAGGATCGTGTGTT
GTTTTAAGAACACATGTGCTGAAAGTTTTTGTATGTTAAATCACTTACCT
TCTATACTAGACTATTTACTATATAACCTTATTTTATCATCAATGATTCT
CTAGTTATTTCATATTTTTCTCTAACTTTCTGATAAACTATATGATGTCA
TGGAATGTTACTTATAAAAATGATGATN

Query= MSMg01no331_f05.g1 MSMg01no331_f05.g1 CHROMAT_FILE:
MSMg01no331_f05.g1 PHD_FILE: MSMg01no331_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:13 2005
         (652 letters)



>mm_chr17_90758081_90759132
          Length = 1052

 Score = 1230 bits (636), Expect = 0.0
 Identities = 648/652 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   attggaaaatgtaatcacatttaaattttgattaactggaagcttaaaaaaaatagatca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 attggaaaatgtaatcacatttaaattttgattaactggaagcttaaaaaaaatagatca 793

                                                                       
Query: 61  acttaggaaaagttcattttgaatccagtgtcctcattttgatagattggtttttgttat 120
           |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 792 acttagaaaaagttcattttgaatccagtgtcctaattttgatagattggtttttgttat 733

                                                                       
Query: 121 atttatgtaaatttcatcaattgagagttcaaagtcaggtggattattgattgttagagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 atttatgtaaatttcatcaattgagagttcaaagtcaggtggattattgattgttagagc 673

                                                                       
Query: 181 tcataaggagacaggggatgttgaagatttggagagaaaaactattaagattttctaaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tcataaggagacaggggatgttgaagatttggagagaaaaactattaagattttctaaca 613

                                                                       
Query: 241 gaataaatatgttaattagatattgaaaatactgggtcacaggctaagggtaagtcctta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gaataaatatgttaattagatattgaaaatactgggtcacaggctaagggtaagtcctta 553

                                                                       
Query: 301 actttcactggtcaaaaaatctttatagacacactttagtttccatacaactctgaggat 360
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 552 actttcactggtcaaaaaatctttatagacacactttagtttccatagaactctgaggat 493

                                                                       
Query: 361 atcatctagcttcttgttgacaacatagaaaaagaataataattgataattattttatag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atcatctagcttcttgttgacaacatagaaaaagaataataattgataattattttatag 433

                                                                       
Query: 421 caagctgtattttaattggtgctaatttataaatatttgatgcaggatcgtgtgttgttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 432 caagctgtattttaattggtgctaatttataaatatttgatgcaggatcatgtgttgttt 373

                                                                       
Query: 481 taagaacacatgtgctgaaagtttttgtatgttaaatcacttaccttctatactagacta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 taagaacacatgtgctgaaagtttttgtatgttaaatcacttaccttctatactagacta 313

                                                                       
Query: 541 tttactatataaccttattttatcatcaatgattctctagttatttcatatttttctcta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tttactatataaccttattttatcatcaatgattctctagttatttcatatttttctcta 253

                                                               
Query: 601 actttctgataaactatatgatgtcatggaatgttacttataaaaatgatga 652
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 actttctgataaactatatgatgtcatggaatgttacttataaaaatgatga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space:   668964
Effective search space used:   668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)