Query= MSMg01no332_b18.b1 MSMg01no332_b18.b1 CHROMAT_FILE:
MSMg01no332_b18.b1 PHD_FILE: MSMg01no332_b18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:13 2005
(443 letters)
>mm_chr17_9875210_9876052
Length = 843
Score = 758 bits (392), Expect = 0.0
Identities = 404/408 (99%)
Strand = Plus / Minus
Query: 36 gggttatgatctacaccacaaaggaatgcaaacccattcttgaccacatgttgctaaaga 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 gggttatgatctacaccacaaaggaatgcaaacccattcttgaccacatgttgctaaaga 784
Query: 96 tggttcattaaatatgggttgttgataaatactactgcttcttctccttctcctcatgct 155
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 tggctcattaaatatgggttgttgataaatactactgcttcttctccttctcctcatgct 724
Query: 156 cctcctcctcaccctcctcttttctcttctgcctcccttcccatccccttcctccctctc 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 cctcctcctcaccctcctcttttctcttctgcctcccttcccatccccttcctccctctc 664
Query: 216 ttattccttctcatcctcctgttatcagggaagtccatatgcttgttttgctttcttacc 275
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 663 ttattccttctcatcctcctgttatcagggaagtccatatgcttgacatgctttcttacc 604
Query: 276 tattggtccaaatagcttccagaggaagctcctgtattttgccttggttactctgtttaa 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tattggtccaaatagcttccagaggaagctcctgtattttgccttggttactctgtttaa 544
Query: 336 tgccacctctgcattctagtaagactacgtagatttggtaaagtcctgaacatggatgaa 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tgccacctctgcattctagtaagactacgtagatttggtaaagtcctgaacatggatgaa 484
Query: 396 atgaattcagtgtctttggggggaaatacaattttattgccctttctg 443
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 atgaattcagtgtctttggggggaaatacaattttattgccctttctg 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_b18.g1 MSMg01no332_b18.g1 CHROMAT_FILE:
MSMg01no332_b18.g1 PHD_FILE: MSMg01no332_b18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:13 2005
(553 letters)
>mm_chr17_9682429_9683381
Length = 953
Score = 464 bits (240), Expect = e-135
Identities = 282/303 (93%), Gaps = 12/303 (3%)
Strand = Plus / Plus
Query: 1 aagttgcttgggcaacatggttaggaaggagntttaggtctttgcagagattcaatagtg 60
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 201 aagttgcttgggcaacatggttaggaagtagttttaggtctttgcagagattcaatagtg 260
Query: 61 agatagcccaatagcaaggaacataaatcactcaggtaatgggagattaaaatggaaagt 120
|||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||
Sbjct: 261 agatagcccaatagcaaggaacgtaaatcactcaggtaatgggagattaaaaggggaagt 320
Query: 121 gacagacatgcgcgggcattaattctaagtcggtgtcattctctaatcatggattcaagt 180
||||||||||| ||| ||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 321 gacagacatgcacggccattaattctaagtccgtgtcattctccaatcatggattcaagt 380
Query: 181 tgtgattcttctccagtcctgaccaatgatgatataagccacaatattgctgctattact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgattcttctccagtcctgaccaatgatgatataagccacaatattgctgctattact 440
Query: 241 gaggactttcttcaaggatatgggttatttggatttttt------gttaaaagcacaatt 294
||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 gaggactttcttcaaggatatgggttatttgga------acaagagttaaaagcacaatt 494
Query: 295 acc 297
|||
Sbjct: 495 acc 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
