Query= MSMg01no334_n07.b1 MSMg01no334_n07.b1 CHROMAT_FILE:
MSMg01no334_n07.b1 PHD_FILE: MSMg01no334_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:23 2005
(594 letters)
>mm_chr17_93659540_93660532
Length = 993
Score = 1087 bits (562), Expect = 0.0
Identities = 583/590 (98%), Gaps = 1/590 (0%)
Strand = Plus / Plus
Query: 5 gaattcatgtttaatagcaagcatatagctgtgttgtttggtgcctggtaaattatttgg 64
|||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgtttaagagtaagcatatggctgtgttgtttggtgcctggtaaattatttgg 264
Query: 65 gaagatatgtttgaaaggattctattttgtgagagtaagatactggagcttcagagaccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaagatatgtttgaaaggattctattttgtgagagtaagatactggagcttcagagaccc 324
Query: 125 tgcagattgtccagaatttagctgtgccatgtgcttcggacaattcattccttacccagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgcagattgtccagaatttagctgtgccatgtgcttcggacaattcattccttacccagc 384
Query: 185 caggcagaaatatggctcgaccctttgagacaaacatctgttcaaatataaatttcctgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caggcagaaatatggctcgaccctttgagacaaacatctgttcaaatataaatttcctgt 444
Query: 245 ttggtgaggcttctgttctattgaagtaaaggtctcgatatggccgaacaagtcaatcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttggtgaggcttctgttctattgaagtaaaggtctcgatatggccgaacaagtcaatcat 504
Query: 305 tataaaccttgttagtgtgacagccccctgtgtattgttaactggaaatgaaacacaaac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tataaaccttgttagtgtgacagccccctgtgtattgttaactggaaatgaaacacaaac 564
Query: 365 acatgaaacccctgcagtatctgcttcacggtgcataaatctaccgtgcatcatgtcact 424
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 565 acatgaaacccctgcagtatctgcttcacggtgcataaatctaccgtgcgtcatgtcact 624
Query: 425 tgaaatttgatggcaatctaccaaatggcagaaaagacttcataactcagagggctatgc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgaaatttgatggcaatctaccaaatggcagaaaagacttcataactcagagggctatgc 684
Query: 485 aaatgagcaggggcttggaataataaggcaaggggacacagcctgtcctttgctctccct 544
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 685 aaatgagcaggggcttggaataata-ggcgaggggacacagcctgtcctttgctctccct 743
Query: 545 cccccacatccttcccagaaagcattccctaggggaatttcttagtggca 594
|||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 744 cccccacatccttcccagaaagcattccctagggtaatttcttagtggca 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 993
Length adjustment: 10
Effective length of query: 584
Effective length of database: 983
Effective search space: 574072
Effective search space used: 574072
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_n07.g1 MSMg01no334_n07.g1 CHROMAT_FILE:
MSMg01no334_n07.g1 PHD_FILE: MSMg01no334_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:23 2005
(505 letters)
>mm_chr17_93863004_93863908
Length = 905
Score = 961 bits (497), Expect = 0.0
Identities = 503/505 (99%)
Strand = Plus / Minus
Query: 1 aggaaatccttcattttcacagcggaaatcaataatgcttaagctactgagccagttagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 aggaaatccttcattttcacagcggaaatcaataatgcttaagctactgagccagttagt 646
Query: 61 gaagagagaaacttggtgtttttttctatttatttcatttacttgtatatcctaaaggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gaagagagaaacttggtgtttttttctatttatttcatttacttgtatatcctaaaggat 586
Query: 121 aaaaatgaaaagttctctcccgagaaaagcaagaagttgaaatatttttctgccaaaagg 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aaaaatgaagagttctctcccgagaaaagcaagaagttgaaatatttttctgccaaaagg 526
Query: 181 aaagttattaaaacggtaaaatatgtgcaccaaattttgaaaaacctccttctgtatgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 aaagttattaaaacggtaaaatatgtgcaccaaattttgaaaaacctccttctgtatgtg 466
Query: 241 gatatttccccactctgtaattgcataaatcatgttgatgggccactgcttcccactaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gatatttccccactctgtaattgcataaatcatgttgatgggccactgcttcccactaaa 406
Query: 301 tgaataaatcatagttgctaagcactgagaatacccatgctccatgtacaggtcctgtgg 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 405 tgaataaatcatagttgctaagcactgagaatacccacgctccatgtacaggtcctgtgg 346
Query: 361 tccccactgaaatcttgttctcttgaaccacgcatttcagcctctggctgccaagtaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tccccactgaaatcttgttctcttgaaccacgcatttcagcctctggctgccaagtaatt 286
Query: 421 ttatgtcttcaataaactaaactgaaccaagctattattactgaattgcaggctattaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ttatgtcttcaataaactaaactgaaccaagctattattactgaattgcaggctattaga 226
Query: 481 agttgaatgtagctattggtgtatc 505
|||||||||||||||||||||||||
Sbjct: 225 agttgaatgtagctattggtgtatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
