Query= MSMg01no335_b17.b1 MSMg01no335_b17.b1 CHROMAT_FILE:
MSMg01no335_b17.b1 PHD_FILE: MSMg01no335_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:45 2005
(519 letters)
>mm_chr17_63984738_63985656
Length = 919
Score = 729 bits (377), Expect = 0.0
Identities = 406/423 (95%), Gaps = 13/423 (3%)
Strand = Plus / Minus
Query: 1 tctgagatcaggtctttgagagctttacatctgtgtgcctagctatgtgcttagctgcat 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tctgagatcaggtcttcgagagctttacatctgtgtgcctagctatgtgcttagctgcat 351
Query: 61 tttagctggtctgtattttaccagaggcattcactagaatgcctgactcaaaactgaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tttagctggtctgtattttaccagaggcattcactagaatgcctgactcaaaactgaacc 291
Query: 121 aggctggcaatacttacacaatatgatttttctcatgagaccaatataaaaaaggctgaa 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 290 aggctggcaatacttacacaatatgatttttctcatgagaacaatataaaaaaggctgaa 231
Query: 181 attcctgtttaaatttcatttccttcttttttcttttttctctacccaaaatctcacctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 attcctgtttaaatttcatttccttcttttttcttttttctctacccaaaatctcacctg 171
Query: 241 tccctgactggcctcaccatgtagctgagaacgggcttgaacatctgatctccctgtttt 300
||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 170 tccctgactggcctcaccatgtagctgagaatgggcttgaacatctgatctccct----- 116
Query: 301 caacacctacatgtgggaattacaggcatatgccacgatacctggtttatatatgcagtg 360
|||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 115 --acac------gtgggaattacaggcatatgccacgatacctggtttatatgtgcagtg 64
Query: 361 gatcaaacctaggtaacactcagctacatccccatccccttgcaatttccaaagaacatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gatcaaacctaggtaacactcagctacatccccatccccttgcaatttccaaagaacatt 4
Query: 421 ata 423
|||
Sbjct: 3 ata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no335_b17.g1 MSMg01no335_b17.g1 CHROMAT_FILE:
MSMg01no335_b17.g1 PHD_FILE: MSMg01no335_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:45 2005
(419 letters)
>mm_chr17_63771675_63772493
Length = 819
Score = 764 bits (395), Expect = 0.0
Identities = 413/419 (98%)
Strand = Plus / Plus
Query: 1 cacaacgaaagctaaagaaatcaagaaaaaattaattcttctgcccacaaacaaaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacaacgaaagctaaagaaatcaagaaaaaattaattcttctgcccacaaacaaaaacaa 260
Query: 61 gtcaccatggggctaaaaacacagcagagtacaccataaaattctttggcagcctggcag 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcaccatggggcaaaaaacacagcagagtacaccataaaattctttggcagcctggcag 320
Query: 121 tggtggtgcaggctttagtcccagcacttggaaggcagaggcgggaggatctctttgagt 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggtagtgcaggctttagtcccagcacttggaaggcagaggcgggaggatctctttgagt 380
Query: 181 tcaaggccagccttgtccacagagttacagctcagccatactgagaccttgttttgggag 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaaggccagcctcgtccacagagttacagctcagccatactgagaccttgttttgggag 440
Query: 241 ggtggggagacatctgcagcaatgtgtgacatcatcagccagcatctactaatgccttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtggggagacatctgcagcaatgtgtgacatcatcagccagcatctactaatgccttaa 500
Query: 301 aactatgacaaaggaaaagggaacagtagtgggagctgagagggactgctgagtcactct 360
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 501 aactatgacaaaggaaaagggaacagtagtgggagccgagaggaactgctgagtcactct 560
Query: 361 gcctcaggttcacaggatttgcagacaggagctgctggtgtgaggggggctgtggacag 419
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcctcaggttcataggatttgcagacaggagctgctggtgtgaggggggctgtggacag 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
