Query= MSMg01no335_p17.b1 MSMg01no335_p17.b1 CHROMAT_FILE:
MSMg01no335_p17.b1 PHD_FILE: MSMg01no335_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:56 2005
(605 letters)
>mm_chr17_81541364_81542368
Length = 1005
Score = 1143 bits (591), Expect = 0.0
Identities = 597/599 (99%)
Strand = Plus / Minus
Query: 7 gaattctgagcattgtctctcaataaattgaacccatctttatccttattataaatcttt 66
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 805 gaattctgagcattgtctctcaataaattaaacccatctttatccttattataaatcttt 746
Query: 67 cctctgtaggcctttaccctaagcactgtttatcaatagaaccattcttggctctttgct 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cctctgtaggcctttaccctaagcactgtttatcaatagaaccattcttggctctttgct 686
Query: 127 tcttagtaggcaccgaaggtataattttgcatctcaatgatccttagatagtcaataagg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcttagtaggcaccgaaggtataattttgcatctcaatgatccttagatagtcaataagg 626
Query: 187 tgaaacaaatgtaataaataaaaatgtactagctaccatcaaagcacatggcaagcatac 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgaaacaaatgtaataaataaaaatgtactagctaccatcaaagcacatggcaagcatac 566
Query: 247 ttttcttgcttgcctgttctattaccttgaatagagaaataagagagtagtcttcacagt 306
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 565 ttttcttgcttgcctgttctattaccttgaatggagaaataagagagtagtcttcacagt 506
Query: 307 gaatcaggaaggaatagcagaacctctatgagtagctggtcttgctgcaacccaacaaac 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaatcaggaaggaatagcagaacctctatgagtagctggtcttgctgcaacccaacaaac 446
Query: 367 caggtggcattcagacctctggaccccaatttctaaaggaagagaactcttaaaatccat 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caggtggcattcagacctctggaccccaatttctaaaggaagagaactcttaaaatccat 386
Query: 427 tttgaggggctaagactccacaaagaagcagattcaagcaagcctggtccagtccgaaga 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttgaggggctaagactccacaaagaagcagattcaagcaagcctggtccagtccgaaga 326
Query: 487 agggacttcctccctgggagatctgggatcactttgagttctcaccatgaaagacacacc 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agggacttcctccctgggagatctgggatcactttgagttctcaccatgaaagacacacc 266
Query: 547 ctgatgttataagcagtttgaagaagaaccaatcattaaaatggaaacgacactgagac 605
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgatgttataagcagtttgaagaagaaccaatcattaaaatggaaacgacactgagac 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no335_p17.g1 MSMg01no335_p17.g1 CHROMAT_FILE:
MSMg01no335_p17.g1 PHD_FILE: MSMg01no335_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:56 2005
(552 letters)
>mm_chr17_81388777_81389726
Length = 950
Score = 963 bits (498), Expect = 0.0
Identities = 538/552 (97%), Gaps = 2/552 (0%)
Strand = Plus / Plus
Query: 1 tttgatatgtaatttttcaatagctttcttgacctgatttttacaacctgattctgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgatatgtaatttttcaatagctttcttgacctgatttttacaacctgattctgtttt 260
Query: 61 gagattagatctaagaagaataacagctggcttcctgggcatggcggtggctgtcctgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagattagatctaagaagaataacagctggcttcctgggcatggcggtggctgtcctgct 320
Query: 121 gtgtggctgcatcgtggccaccgtcagcttcttctgggaggaaagcctgacccagcacgt 180
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtggctgcattgtggccacggtcagcttcttctgggaggaaagcctgacccagcacgt 380
Query: 181 ggccggactcctattcctcatgacaggtaaactgtataccgacagcctcctccctgtggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 ggccggactcctattcctcatgacaggtaaactgtataccgacagcctcctccttgtggc 440
Query: 241 acacagtactaggctcggtcatatcactattaattttggtttcggtggtgaggagtgagc 300
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aca--gtactaggctcggtcatatcactattaattttggtttcggtggtgaggagtgagc 498
Query: 301 aagcagaagctcattcatctttggtagaaaacaaagaatttaaagggagcagggtacaaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 499 aagcagaagctcattcatctttggtagaaaacaaagaatttaaagggagcagtgtacaca 558
Query: 361 gtgcactggtcaattttcccgcagtagcattagtaggtcagagggaagggtcctgcattc 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gtacactggtcaattttcccgcagtagcattagtaggtcagagggaagggtcctgcattc 618
Query: 421 attctcaattggagtcgatgctgtattttctgtcttattgcttaattctatgtcttgggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 attctcaattggagtcgatgctgtattttctgtcttattgcttaattctatgtcttgggg 678
Query: 481 agaaaggtcagtagctaaaagtcccctcatagtctatgtactggggatgtgcccttggca 540
|||||||||||||||||||||||||||||||||||||| || |||| ||| |||||||
Sbjct: 679 agaaaggtcagtagctaaaagtcccctcatagtctatgaaccagggacgtgtccttggcg 738
Query: 541 ttactgttggag 552
||||||||||||
Sbjct: 739 ttactgttggag 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 950
Length adjustment: 10
Effective length of query: 542
Effective length of database: 940
Effective search space: 509480
Effective search space used: 509480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
