Query= MSMg01no337_l10.b1 MSMg01no337_l10.b1 CHROMAT_FILE:
MSMg01no337_l10.b1 PHD_FILE: MSMg01no337_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:10 2005
(620 letters)
>mm_chr17_66702061_66703076
Length = 1016
Score = 1133 bits (586), Expect = 0.0
Identities = 610/620 (98%), Gaps = 4/620 (0%)
Strand = Plus / Minus
Query: 1 ggtcagagccccaaggatgtaattagttgaaaggccaccgtggacactcccaggtcagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 ggtcagagccccaaggatgtaattagttgaaaggccaccgtggacactcccaggtcagta 757
Query: 61 ttacgtaatgtaggtatttctcaatccagtgaggttagcaattaaggttattcattacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ttacgtaatgtaggtatttctcaatccagtgaggttagcaattaaggttattcattacac 697
Query: 121 cctaacagcacacacacctttcattgcagagatgataggagacttttctttgtatgcatg 180
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 696 cctaacagcacacacacctttcattgcagagatggtagtagacttttctttgtatgcatg 637
Query: 181 tgcaggggctggggagtgaccttttaaagggatttggagattaaacttgaaaggggaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tgcaggggctggggagtgaccttttaaagggatttggagattaaacttgaaaggggaagt 577
Query: 241 tatttcaggttgtcttcagggaatttttccccagagtgctctaactcttaagatggctac 300
|||||||||||| |||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 576 tatttcaggttgccttcagggaatttttccccagagtact----ctcttaagatggctac 521
Query: 301 ggaagccacggagatggctgcagcctgaacggaattgttaccattagcgaagtaattacc 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ggaagccgcggagatggctgcagcctgaacggaattgttaccattagcgaagtaattacc 461
Query: 361 aaaccgagttagaagccactgtctgctggtgattgctcctgctgtgggtattgctgagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aaaccgagttagaagccactgtctgctggtgattgctcctgctgtgggtattgctgagcc 401
Query: 421 gtgattagataggaccagaaccaagggagttatctggtagctcatcatcttccggtaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gtgattagataggaccagaaccaagggagttatctggtagctcatcatcttccggtaaac 341
Query: 481 aaactcagacggatgtggggagagcagagggagttgctttcccgcagcctgaatgattgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aaactcagacggatgtggggagagcagagggagttgctttcccgcagcctgaatgattgc 281
Query: 541 tctccgcattgcgcacggttggtgcagctgaagtagctgcagtaggtccggagcgatgtg 600
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 280 tctccgcattgcgcacggttggtgcagctgaagtagctgcagtaggcccggagcgatgtg 221
Query: 601 agaaattcaggttttcacgt 620
||||||||||||||||||||
Sbjct: 220 agaaattcaggttttcacgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1016
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1006
Effective search space: 613660
Effective search space used: 613660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_l10.g1 MSMg01no337_l10.g1 CHROMAT_FILE:
MSMg01no337_l10.g1 PHD_FILE: MSMg01no337_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:10 2005
(520 letters)
>mm_chr17_66546979_66547898
Length = 920
Score = 998 bits (516), Expect = 0.0
Identities = 519/520 (99%)
Strand = Plus / Plus
Query: 1 atgtcccagaaaagagaacttcctttgacaggtaagtgttcaaaagggttcctggctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtcccagaaaagagaacttcctttgacaggtaagtgttcaaaagggttcctggctgct 260
Query: 61 caatttgcacaatgtagggaaaaaagtcctctgaagcccattggtgcttttggaccctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caatttgcacaatgtagggaaaaaagtcctctgaagcccattggtgcttttggaccctgc 320
Query: 121 cagtgggtttggcaaggcacagatatgggaggacaattctggatagtggcatgtctggag 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cggtgggtttggcaaggcacagatatgggaggacaattctggatagtggcatgtctggag 380
Query: 181 tatctcaccattttcttcatgatgctcccatgagattgagacagtgagaggactcggttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatctcaccattttcttcatgatgctcccatgagattgagacagtgagaggactcggttg 440
Query: 241 cataaaaatgcaatctgtggtgtatgaatttcaggattgtacccattagagcaggcgtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cataaaaatgcaatctgtggtgtatgaatttcaggattgtacccattagagcaggcgtgc 500
Query: 301 atcagaaaacttttggacattttttctgctacagtgaaagaataatttgccttcatcctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcagaaaacttttggacattttttctgctacagtgaaagaataatttgccttcatcctc 560
Query: 361 atccctggctgtgttcatacgtgcacctcagctcttgtgcatttgagtcttcaggaggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atccctggctgtgttcatacgtgcacctcagctcttgtgcatttgagtcttcaggaggaa 620
Query: 421 acatttggtagggtagatgcaagatgtacatgtgggttcactgcttgccttctatagatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acatttggtagggtagatgcaagatgtacatgtgggttcactgcttgccttctatagatg 680
Query: 481 gatgacactggaggtgcttcctgtaactatgcacatggtc 520
||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gatgacactggaggtgcttcctgtaactatgcacatggtc 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
