Query= MSMg01no338_o22.b1 MSMg01no338_o22.b1 CHROMAT_FILE:
MSMg01no338_o22.b1 PHD_FILE: MSMg01no338_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:40 2005
(512 letters)
>mm_chr17_42763014_42763925
Length = 912
Score = 978 bits (506), Expect = 0.0
Identities = 512/516 (99%), Gaps = 4/516 (0%)
Strand = Plus / Plus
Query: 1 tgtatgaccaccgacaaacccactgggagacagaattacaaagaactttctatgtaccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tgtatgaccaccgacaaacccactgggagacagaattacaaagaactttctatgtaccaa 256
Query: 61 tgtgtccccaacaattattatatgccattcatgaaaacctggtgacctttggatagttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tgtgtccccaacaattattatatgccattcatgaaaacctggtgacctttggatagttac 316
Query: 121 tacatgctcaatgaaatacagaacatgggaaaacagaggttaactatatatattagcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tacatgctcaatgaaatacagaacatgggaaaacagaggttaactatatatattagcaat 376
Query: 181 ccacaatgaaattcgacatactctaaaatattaaggaggaatttctcattaggcaacaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ccacaatgaaattcgacatactctaaaatattaaggaggaatttctcattaggcaacaga 436
Query: 241 aaaatttaacagtacctttggcgagacttatttctactcccttaatgcaatggttttcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aaaatttaacagtacctttggcgagacttatttctactcccttaatgcaatggttttcat 496
Query: 301 tgattgattttgtttgtttgtttgtttgttt----acccagtgtctagctatgctaatag 356
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 497 tgattgattttgtttgtttgtttgtttgtttgtttacccagtgtctagctatgctaatag 556
Query: 357 tttaaaaacaatattggtgatggcgataataactagcatttaaatgtctactaagtgctg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tttaaaaacaatattggtgatggcgataataactagcatttaaatgtctactaagtgctg 616
Query: 417 aaactatactcatgcatgtatatgcttatatacatataatagtatgtaaattgtataggt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aaactatactcatgcatgtatatgcttatatacatataatagtatgtaaattgtataggt 676
Query: 477 acaatgactgtatttacttagacatgctctttactg 512
||||||||||||||||||||||||||||||||||||
Sbjct: 677 acaatgactgtatttacttagacatgctctttactg 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_o22.g1 MSMg01no338_o22.g1 CHROMAT_FILE:
MSMg01no338_o22.g1 PHD_FILE: MSMg01no338_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:40 2005
(436 letters)
>mm_chr17_42934530_42935365
Length = 836
Score = 273 bits (141), Expect = 2e-77
Identities = 153/157 (97%)
Strand = Plus / Minus
Query: 1 caggtgctgctggccatgacctaataaggggaaaggaagttttcctggctgtaggatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 caggtgctgctggccatgacctaataaggggaaaggaagttttcctggctgtaggatatc 295
Query: 61 ttctctggctaggcacaggtggtgtgttgcagggcttctaccaccagtacacacaggctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ttctctggctaggcacaggtggtgtgttgcagggcttctaccaccagtacacacaggctc 235
Query: 121 aggatggagtgtggaggatggggtggggagagatagg 157
|||||||||||||| || || ||||||| ||||||||
Sbjct: 234 aggatggagtgtggggggtgaggtggggggagatagg 198
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
