Query= MSMg01no340_b20.b1 MSMg01no340_b20.b1 CHROMAT_FILE:
MSMg01no340_b20.b1 PHD_FILE: MSMg01no340_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:05 2005
(687 letters)
>mm_chr17_63795461_63796549
Length = 1089
Score = 1205 bits (623), Expect = 0.0
Identities = 663/685 (96%), Gaps = 16/685 (2%)
Strand = Plus / Minus
Query: 5 gaattccttctttgac-atgttatttattcatgtttaaaagtgattctgattatcatacc 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gaattccttctttgacaatgttatttattcatgtttaaaagtgattctgattatcatacc 743
Query: 64 ttccacgctttgttccctcttccacctgcataactccccagaatgttttgatatcatcga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ttccacgctttgttccctcttccacctgcataactccccagaatgttttgatatcatcga 683
Query: 124 tataaaatttattgcacaattgatgttataccgttcacctcgtctaagtatttggggaga 183
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 682 tataaaatttattgcacaattgatgttataccgttcacctcgtataagtatttggggaga 623
Query: 184 ctagaataagatggcagattttaaagcactttgtaaagcttgaaaatatataaaaatgaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ctagaataagatggcagattttaaagcactttgtaaagcttgaaaatatataaaaatgaa 563
Query: 244 ttttagaattgcaggaatgtaatgataatgatgaaataaagtgcaccacttttataaata 303
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttttagaatggcaggaatgtaatgataatgatgaaataaagtgcaccacttttataaata 503
Query: 304 ttaatttgcactttgctcctttttgttgattattcttcttattggcttactagtaggtac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 502 ttaatttgcactttgctcctttttgttgattattcttcttattggcttactagcaggtac 443
Query: 364 tgtgtgcaggatgcttgcttataaacttgctcatgagaaggtcttaaggatttttgtaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tgtgtgcaggatgcttgcttataaacttgctcatgagaaggtcttaaggatttttgtaat 383
Query: 424 atagagaattcattttctctcataagtccagtgtttaaaaacataatgaaacctccttga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atagagaattcattttctctcataagtccagtgtttaaaaacataatgaaacctccttga 323
Query: 484 taatgctattttaatgttggcagacaacaaaaagacta-tttttttagaacacaattgga 542
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 322 taatgctattttaatgttggcagacaacaaaaagactattttttttagaacacaattgga 263
Query: 543 cttctttgttctaaattatagtttaggagaaaatatatttagaagaatatgggaacatat 602
|||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cttctttgttttaaattatagtttaggagaaaatatatttagaagaatatggg------- 210
Query: 603 tcttctaaacatgttagcatttaagtctgcctgttttcctataaatttttagagcatcaa 662
|||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 209 -------aacatgttagcatttaagtctgcctgatttcctataaatttttagagcatcaa 157
Query: 663 aaatgctttaaataatctcctgctt 687
||||||||| |||||||||||||||
Sbjct: 156 aaatgctttcaataatctcctgctt 132
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1089
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1079
Effective search space: 730483
Effective search space used: 730483
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_b20.g1 MSMg01no340_b20.g1 CHROMAT_FILE:
MSMg01no340_b20.g1 PHD_FILE: MSMg01no340_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:05 2005
(615 letters)
>mm_chr17_63608392_63609409
Length = 1018
Score = 1149 bits (594), Expect = 0.0
Identities = 611/618 (98%), Gaps = 3/618 (0%)
Strand = Plus / Plus
Query: 1 tgatcaagcaatttcattgaaaatggaatgaactcttcctgcagtcctgactcagcagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgatcaagcaatttcattgaaaatggaatgaactcttcctgcagtcctgactcagcagtt 260
Query: 61 ttactaagatgctaaagaagattaagtgcaagtccttataggttcagactagcctttgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttactaagatgctaaagaagattaagtgcaagtccttataggttcagactagcctttgat 320
Query: 121 ttcatctgtccttcgctgcccctgctaatgaccccacggaaagtgctctgcatcagggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcatctgtccttcgctgcccctgctaatgaccccacggaaagtgctctgcatcagggga 380
Query: 181 aaagtgtttcctgctggtgcttttggtgatcgctcacctgttggtactgacat---gtct 237
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 aaagtgtttcctgctggtgcttttggtgatcgctcacctgttggtactgacatcatgtct 440
Query: 238 gtaactgtctagctatacactgccgaagacccttctcgtcaacctgtgctcctcaagtcc 297
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 gtaactgtctagctatacactgccgaaaacccttctcgtcaacctgtgctcctcaagtcc 500
Query: 298 tgattcatgagaagccacccacactctcttctcccttcacccccatctcccaggtctcct 357
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgattcatgggaagccacccacactctcttctcccttcacccccatctcccaggtctcct 560
Query: 358 gctgctctcttgcagactgctgtgtcccagggtgtaacttcgcccaccctcctcctcact 417
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 gctgctctcttgcagactgctgtgtcccagggtgtaacttcacccaccctcctcctcact 620
Query: 418 ataatacgacacatggacgtgattcactcttacccaccctttcatactgacatctacaca 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataatacgacacatggacgtgattcactcttacccaccctttcatactgacatctacaca 680
Query: 478 tatcagctgagtctgcactaattaagggtggatataagacagacctaactcgtccccaca 537
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 681 tatcagctgagtctgcactaattaagggtggatataagacagacctaactcatccccaca 740
Query: 538 cctttaactttcccactaacaccatcaaaggcaggcagcagaccacacacctacattcac 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cctttaactttcccactaacaccatcaaaggcaggcagcagaccacacacctacattcac 800
Query: 598 tcatacaactttccagaa 615
||||||||||||||||||
Sbjct: 801 tcatacaactttccagaa 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1018
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1008
Effective search space: 609840
Effective search space used: 609840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
