NNCCTCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCAAGCCCATGGTCAGCTCAAGGACTTTCTAGGATGTTGGAAC
ATTGGTGAAGGCTTAGCTATGTCAGAATTCAATCACAAAAGGCACTTATA
CTAAAAGAGAGCACGTGGATCCATACACCAGGTTAACTCGGGGATAGGGT
ATGAGTATATGGGTTAATGAGAACACCAAAACTCCAGGGGTTGAGCGCTT
CCAGGCCTCTCAGCCTGTCAAGCAGACTTCACAGGAGTGTGTGTGGCATA
CAGGGAGATGAGTGGCATTGGGATGCATGATGTAAAACTCACAAAGAATC
AATTTTAAAAGGCTTTTGAAAAAAAAAGAAGTGTTGAAGAAGTAAAAATG
GGCCCAGCTATGGTGGAGCATGCCTTTAGTACCAGCACTCCGGAGACAGA
GGCAAGCCAATCTCTGAATTTGAGGACAGTCTGGTCTATAGAGATAGTAC
CAGGACATCCACAGCTACACAGAGAAACCCTGTCTCAAAATCAGTTCAAA
ATAGCTAACTGGAGTCTATAGTATATGGGTTATACAGTATATATGACTAT
GTAGTCCTCAGTTAGTTACATGCACTATTGGTCAGGCATGGTGACGCTCA
CCTGTTACGCCAGCAATCTTTTCTTTCTTTCTTTTTTTTTTTCTGAGACA
GGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGG

NNCCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTGTCAGACTTTGAAGGACAGATG
AAAACCTGGGAAGGGATGGTGTTCTAATGTGTCCTCCAGACATTTTAATG
TCCCACCATCTTTGTTTTTTCCTGAAATGTAATTAGTTTATAGAATTCTA
TTTATGTCAGTCAGTCAACTTCAGGTTTGTTGCCTCTTGTTGCCCTCAAA
CGTGACTAGTTCATTGTATTAAAGAAGGCTAACTCACAGTTGACGCCTAT
CTCTTAGTTCTAAAGTAGTCTGGTCTCTGATCATATCAGCCATCTTTAAT
TGCCTTAGGAACTCTGGTGTGATTTGTTAGGGGTTGAGGGGGGCTCTGAA
AGTTTGGATTTCTAGGAGTAAAGATTTCTCATCTTTTGCAGTAAACCCTT
CTCTTCTGGGAATCAATGATGAAGTTTAGGGTACAGGAGATAAATAACAT
CTCCTGATAAGCAAAGTTATGTAGCATCTTCAATCTATGAAAGCCGTAAT
AGCAGAAGTTGTAAGAAACTGGATTGCTGGTAATTAAAGCTATCTGAAGA
ATTCAGTCTTCTTCATTGGAAGGAATTTTTTCCCATTTTTTGAAAACTGG
TATCATCCCTTTCCAGACTTTTGGTCAAAAAGGGACTTCCTAAGTTCCCC
TAAGTATTCTTTAATCAACAAAGGCGGGTTGGGTAAAATAAAAAAATATT
AAA

Query= MSMg01no340_j21.g1 MSMg01no340_j21.g1 CHROMAT_FILE:
MSMg01no340_j21.g1 PHD_FILE: MSMg01no340_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:39 2005
         (472 letters)



>mm_chr17_75818336_75819207
          Length = 872

 Score =  822 bits (425), Expect = 0.0
 Identities = 460/477 (96%), Gaps = 10/477 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtcagactttgaaggacagatgaaaacctgggaagggatggtgttctaatgtgtcctcc 60
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtcagactttgaagaacagatgaaaacctgggaagggatggtgttctaatgtgtcctcc 260

                                                                       
Query: 61  agacattttaatgtcccaccatctttgttttttcctgaaatgtaattagtttatagaatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacattttaatgtcccaccatctttgttttttcctgaaatgtaattagtttatagaatt 320

                                                                       
Query: 121 ctatttatgtcagtcagtcaacttcaggtttgttgcctcttgttgccctcaaacgtgact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 ctatttatgtcagtcagtcaacttcaggtttgttgcctcttgttgccctcaaatgtgact 380

                                                                       
Query: 181 agttcattgtattaaagaaggctaactcacagttgacgcctatctcttagttctaaagta 240
           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
Sbjct: 381 agttcattgtattaaagaaggctaactcacagctgacgcctatctcttagttcta----- 435

                                                                       
Query: 241 gtctggtctctgatcatatcagccatctttaattgccttaggaactctggtgtgatttgt 300
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 436 gtctggtctctgatcatatcagccatctttaactgccttaggaactctggtgtgatttgt 495

                                                                       
Query: 301 taggggttgagggggg-----ctctgaaagtttggatttctaggagtaaagatttctcat 355
           ||||||||| ||||||     |||||||||||||||||||||||||||||||||||| ||
Sbjct: 496 taggggttgggggggggggggctctgaaagtttggatttctaggagtaaagatttcttat 555

                                                                       
Query: 356 cttttgcagtaaacccttctcttctgggaatcaatgatgaagtttagggtacaggagata 415
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ctttttcagtaaacccttctcttctgggaatcaatgatgaagtttagggtacaggagata 615

                                                                    
Query: 416 aataacatctcctgataagcaaagttatgtagcatcttcaatctatgaaagccgtaa 472
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aataacatctcctgataagcaaagttatgtagcatcttcaatctatgaaagccgtaa 672


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space:   398244
Effective search space used:   398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)