Query= MSMg01no341_k07.b1 MSMg01no341_k07.b1 CHROMAT_FILE:
MSMg01no341_k07.b1 PHD_FILE: MSMg01no341_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:57 2005
(400 letters)
>mm_chr17_73143806_73144605
Length = 800
Score = 721 bits (373), Expect = 0.0
Identities = 390/397 (98%), Gaps = 4/397 (1%)
Strand = Plus / Plus
Query: 6 gaattccacagc--ttttccaacagcaacttgtttaaaaaccctgttatcttcttccctt 63
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccacagcagttt--caacagcaacttgtttaaaaaccctgttatcttcttccctt 263
Query: 64 tcctgctttgcttccacgtcccttcgtgagtatttcccaggaacactgtccagatacaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcctgctttgcttccacgtcccttcgtgagtatttcccaggaacactgtccagatacaat 323
Query: 124 gcttgcctagagaggaagtgttttcgtggaaggctcacttcagactctgcttgcgcagag 183
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcttgcctagagaggaagtgtttgcgtggaaggctcacttcagactctgcttgcgcagag 383
Query: 184 gcagagggcacagagctgaagaccaggagggactctcagagaccggttagcccacttcca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcagagggcacagagctgaagaccaggagggactctcagagaccggttagcccacttcca 443
Query: 244 gcaatcttacagtgaatcaagctgaggtccttggactgtggagtcagaagcagagttaat 303
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 444 gcaatcttacagtgaatcaagctgaggtccagggactgtggagtcagaagcagagttaat 503
Query: 304 gtcaacgttgaaacctgccagccttgctgagactgagaagctaataaagatgaataagta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtcaacgttgaaacctgccagccttgctgagactgagaagctaataaagatgaataagta 563
Query: 364 actacataataaccaggaggcttaggagttgctgagg 400
|||||||||||||||||||||||||||||||||||||
Sbjct: 564 actacataataaccaggaggcttaggagttgctgagg 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_k07.g1 MSMg01no341_k07.g1 CHROMAT_FILE:
MSMg01no341_k07.g1 PHD_FILE: MSMg01no341_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:57 2005
(322 letters)
>mm_chr17_73328164_73328885
Length = 722
Score = 592 bits (306), Expect = e-173
Identities = 318/322 (98%)
Strand = Plus / Minus
Query: 1 attccctgacaagtatagtgaagtgtttccatatcaaagttattgggacacgtttcctac 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 522 attccctgacaagtatagtgaagtgtttccatatcaaagttattgggccacgtttcctac 463
Query: 61 catcatcttcattcagacccagatcaatttaagtggaattcaccattactcacatggagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 catcatcttcattcagacccagatcaatttaagtggaattcaccattactcacatggagc 403
Query: 121 agatgctgatttcccagctgggtaccgccgttgaaatctgtaatgagaataggatgcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 agatgctgatttcccagctgggtaccgccgttgaaatctgtaatgagaataggatgcact 343
Query: 181 cttaagtcagatgaggctcagcacctgggcaaggaaaacacagctttgtgagaacgagtg 240
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 342 cttaagtcagatgaggctcagcacctgggcaaggaaaacacagcttcgtgagaaggagtg 283
Query: 241 aacggatcaggtacaagtctaaacaggtgactcattcatatggtgagcatctgcttggct 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 282 aacggatcaggtacaagtctaaacaggtgactcattcatatggcgagcatctgcttggct 223
Query: 301 ccagactctgggaagacaaggt 322
||||||||||||||||||||||
Sbjct: 222 ccagactctgggaagacaaggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
