Query= MSMg01no342_f12.b1 MSMg01no342_f12.b1 CHROMAT_FILE:
MSMg01no342_f12.b1 PHD_FILE: MSMg01no342_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:50 2005
(458 letters)
>mm_chr17_12992043_12992901
Length = 859
Score = 864 bits (447), Expect = 0.0
Identities = 456/459 (99%), Gaps = 1/459 (0%)
Strand = Plus / Minus
Query: 1 tgtggctgtgggaatcaaatgcctgccctctggaagattaccacttagctatctctccgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tgtggctgtgggaatcaaatgcctgccctctggaagattaccacttagctatctctccgg 600
Query: 61 gtccacccctcaaagcttttaaaatgataatatgaaaattcttcactgaaccattgccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gtccacccctcaaagcttttaaaatgataatatgaaaattcttcactgaaccattgccaa 540
Query: 121 gaaattttattgcaaaattcctttttatcaaagtaagataagacggtgccaaaagctgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gaaattttattgcaaaattcctttttatcaaagtaagataagacggtgccaaaagctgca 480
Query: 181 aaccaaagggagccagctgctcca-ggaggagggctttctgtctatgagccttctgcaga 239
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 479 aaccaaagggagccagctgctccagggaggggggctttctgtctatgagccttctgcaga 420
Query: 240 gggatggtctcggctggatggagagtgtgcggcacttggcagagcacacaggtaccatcc 299
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gggatgggctcggctggatggagagtgtgcggcacttggcagagcacacaggtaccatcc 360
Query: 300 atctcttagctgtgcggccctgttctcccagggcttcctaggagcctgatgtcctattgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 atctcttagctgtgcggccctgttctcccagggcttcctaggagcctgatgtcctattgt 300
Query: 360 acagtgtgctctgagttctgcagtatcaccactagggatagcgtgtgcttagcagtcgaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 acagtgtgctctgagttctgcagtatcaccactagggatagcgtgtgcttagcagtcgaa 240
Query: 420 agccctcggcctctatatgcttgggcttgatatgtggaa 458
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 agccctcggcctctatatgcttgggcttgatatgtggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 859
Length adjustment: 10
Effective length of query: 448
Effective length of database: 849
Effective search space: 380352
Effective search space used: 380352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_f12.g1 MSMg01no342_f12.g1 CHROMAT_FILE:
MSMg01no342_f12.g1 PHD_FILE: MSMg01no342_f12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:50 2005
(406 letters)
>mm_chr17_12812652_12813457
Length = 806
Score = 756 bits (391), Expect = 0.0
Identities = 405/415 (97%), Gaps = 9/415 (2%)
Strand = Plus / Plus
Query: 1 cacatctcatagcaaggaatcaaagcaaactacatcaaagcattagacatcaaacagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cacatctcatagcaaggaatcaaagcaaactacatcaaagcattagacatcaaacagaga 251
Query: 61 caagaaattagtggaaatgccataggaggattggttataattcacagcttcataatgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 caagaaattagtggaaatgccataggaggattggttataattcacagcttcataatgggc 311
Query: 121 aaggtcagtctaaatgtgacaaaaaaaaaaaaaaaa---------cagaaacaacaacaa 171
|||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 312 aaggtcagtctaaatgtgacaaaaaaaaaaaaaaaaaaaaaaaaacagaaacaacaacaa 371
Query: 172 aaacaacaacaacaacaaaaatggtccagggcctatgggagagggattagtctgtatgca 231
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 372 aaacaacaacaacaacaaaaatggtccagggcctgtgggagagggattagtctgtatgca 431
Query: 232 ttcaccacagaaatacagagttgaattgaaacgctgtcaccactggtaaacctggataaa 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ttcaccacagaaatacagagttgaattgaaacgctgtcaccactggtaaacctggataaa 491
Query: 292 gtgtttagtgctatacaaagggctggctttctgaatgtatgtggaaagctctaacaaaac 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gtgtttagtgctatacaaagggctggctttctgaatgtatgtggaaagctctaacaaaac 551
Query: 352 cgagggagctgggcaatggtagtgtgcagcttaaatccaaatacttcggaggcag 406
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 cgagggagctgggcaatggtagtgtgcagcttaaatccaaatacttcggaggcag 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
