Query= MSMg01no344_b02.b1 MSMg01no344_b02.b1 CHROMAT_FILE:
MSMg01no344_b02.b1 PHD_FILE: MSMg01no344_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:08 2005
(366 letters)
>mm_chr17_8831916_8832681
Length = 766
Score = 681 bits (352), Expect = 0.0
Identities = 361/364 (99%)
Strand = Plus / Plus
Query: 1 tcctgatgttagcttctgggcttcaccgtgtgtacactggtgaatgttttgtgggtaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctgatgttagcttctgggcttcaccgtgtgtacactggtgaatgttttgtgggtaggc 260
Query: 61 ttgcatgtatacatatgcacacacgtacacacatgcacaaagagacagaggcacagagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgcatgtatacatatgcacacacgtacacacatgcacaaagagacagaggcacagagat 320
Query: 121 agagagagagacagagagatcgcatggtaaagagagaacaggacaagaagctggtggctg 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagagagagacagagagatcacatggtaaagagagaacaggacaagaagctggtggctg 380
Query: 181 ctacatgcaaacttgggatggatgcaactcaggcctccagaggtggtggttatagggcag 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 ctacatgcaaacttgggatggatgcaactcaggcctccagatgtggtggttatagggcag 440
Query: 241 tcagctgtgtctgataccactcctgaagacaacctttgtaggattgccaggacaagatcc 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagctgtgtctgctaccactcctgaagacaacctttgtaggattgccaggacaagatcc 500
Query: 301 ccatggtccctcgggcccctgggaagcatctctcttactcttagatctaagagggaggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccatggtccctcgggcccctgggaagcatctctcttactcttagatctaagagggaggac 560
Query: 361 cttg 364
||||
Sbjct: 561 cttg 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 766
Length adjustment: 9
Effective length of query: 357
Effective length of database: 757
Effective search space: 270249
Effective search space used: 270249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_b02.g1 MSMg01no344_b02.g1 CHROMAT_FILE:
MSMg01no344_b02.g1 PHD_FILE: MSMg01no344_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:08 2005
(426 letters)
>mm_chr17_9036291_9037115
Length = 825
Score = 789 bits (408), Expect = 0.0
Identities = 420/424 (99%), Gaps = 1/424 (0%)
Strand = Plus / Minus
Query: 1 tcacaaaggaaagagagccttggcatcagcgggcaatggtgagcgatcactggcacaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tcacaaaggaaagagagccttggcatcagcgggcaatggtgagcgatcactggcacaatg 564
Query: 61 aacccacgcaacttaaaccacacatttacacaccctttgcataggcaccagcaatcctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aacccacgcaacttaaaccacacatttacacaccctttgcataggcaccagcaatcctga 504
Query: 121 ggactctagcctggggaagcacctgtgtgtgagaagagcaagcaagctggggtccacaaa 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggactctagcct-gggaagcacctgtgtgtgagaagagcaagcaagctggggtccacaaa 445
Query: 181 cagtgaggccggctggtcagcccgtgcttacagccacacaagggctggaaacccagaggg 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 444 cagtgaggccggctggtcagcccgtgcttacagccacacgagggctggaaacccagaggg 385
Query: 241 atgagagagctaagtctgtaacttaaagattattctcacaccagttcagggctcttcgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atgagagagctaagtctgtaacttaaagattattctcacaccagttcagggctcttcgcc 325
Query: 301 ttccaataggaattggtgtgtctgtattgttgttactttgtcaaacttatgcgtgttcta 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 324 ttccaataggaattggtgtgtctgtattgttgttaccttgtcaaacttatgcgtgttcta 265
Query: 361 tcttttttcactacttttgaaaattaatcatttttattttgtggggtgaaggggaatggt 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 264 tcttttttcactacttttgaaaattaatcatttttattttgtggggggaaggggaatggt 205
Query: 421 tgtt 424
||||
Sbjct: 204 tgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 825
Length adjustment: 9
Effective length of query: 417
Effective length of database: 816
Effective search space: 340272
Effective search space used: 340272
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
