TTCTGCGTTCTTATTACTTCCTTTAGTTCCCGAGTTTTGGGGATGTCGCA
GCATCCCCCCCCCAGAGGAGACCAGCCTGAGAGTAGATCGCTAAGTCTCG
GTGTAACCGGCTCTCGCTGAACCACCTCAGCTCGGGGGGGCGCCCGAAAA
AAAATTTTTGGGCCGGGCCCCGCCCTAAAATTACGGNAAACGTCCAACCT
TTATTTTGGTGGCANCAAAAAGAGAAAATTCCCCGGCCCGGGGNAAAAAA
TTTCCCAAATTTTTTTTTTTTTTTGGGGCGGGGGCNCCCTAATAAAAAAA
AAATTTTTTTATAANTATGTGGGGGCGGGCGCCCCCCCAATAAAATTTTT
TTTTTTTCCCCCGTCCCCCCCCACAAGNNNAAAATCCCCCCCTTAAAAAA
AACCCCCCCTTTTTTTTTTCCCCCCCCCCCCCCCCTATTTTTTTTGTGTG
GTGGGGGGGGGGGGGGGGGCACCAACCCCCTCTTNTTTTTCTTTTTTTTT
TTTTTTTTCCCCCCCCCCCAAAAGTGGTGGGGGGGGGGGGCGGGGGCCCC
CACCCCACCCTCAATCGCTTGTTTCGCGGCACCCTTATCTCTCCACTATT
TTCTTANNAACAACCCCAGGGCCCACACCCTTCTCCCAAAAAGTTGTTTG
TTTGGGGNNGGTTTTTTTTTTATCNNNANCCAANATATTTGTNAACTTTT
CTATATACTTTGAANGGGAGNCAGCCCCCCAANTATTTTTTCTTCGTCTT
TTTTTTGCCC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTCTAATGCAATTTCTATTTCCTGAGCACATAGTATGTGTCAGG
CAAATTGCACCTTTGAATTTTTATAAAAATTCAGCAAGTAAATAACTATA
AGAATTTTCATTTTAGAGATAAAAATTTTTCTCATAATTGAATGGAGTGA
GATAGATTTTTCTATTTATTTATAAGATGTTATAGGGGTAGAGTCTCTCA
GAGTCTAAATCTTTTTTATAAAACAAGATAATCAAAGCAGAGAGAGAACT
TATTCCAGGTATGTAATACAGTATTATACCCTACAGTATTTTACATATAC
TGTATAAACGGTATACTACATATACTGCATAAACAGTATATTACATATAC
TATATATACAGCATACACTATAGTGTATACATACTATAGTAGTGTTACAT
AATACTTTTGGTATGTGAATGACAAAGCTCACATTCTTTTACATTGTTAT
ACTATCTTTTGAAAGTGCTTGCTTCATGTAGATATATCAGTGAGGGGAAT
TATAGTGTCGATGTTAAGAGTCTTAGATGAATAATTTAAAGGAAACCCTG
TAACCAATATATAGGGCAACTGCCATTCACATTTAATGATGACATTTGAA
TATTTGTTTGAAGGGGAACCCTATTAATGCGTTATAATAATATACGCCTG
GTGCCGTTGAAAACCCTTGGCAAAATATG

Query= MSMg01no345_e19.g1 MSMg01no345_e19.g1 CHROMAT_FILE:
MSMg01no345_e19.g1 PHD_FILE: MSMg01no345_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:43 2005
         (498 letters)



>mm_chr17_65389552_65390449
          Length = 898

 Score =  862 bits (446), Expect = 0.0
 Identities = 455/458 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctaatgcaatttctatttcctgagcacatagtatgtgtcaggcaaattgcacctttgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tctaatgcaatttctatttcctgagcacatagtatgtgtcaggcaaattgcacctttgaa 399

                                                                       
Query: 61  tttttataaaaattcagcaagtaaataactataagaattttcattttagagataaaaatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tttttataaaaattcagcaagtaaataactataagaattttcattttagagataaaaatt 339

                                                                       
Query: 121 tttctcataattgaatggagtgagatagatttttctatttatttataagatgttataggg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tttctcataattgaatggagtgagatagatttttctatttatttataagatgttataggg 279

                                                                       
Query: 181 gtagagtctctcagagtctaaatcttttttataaaacaagataatcaaagcagagagaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gtagagtctctcagagtctaaatcttttttataaaacaagataatcaaagcagagagaga 219

                                                                       
Query: 241 acttattccaggtatgtaatacagtattataccctacagtattttacatatactgtataa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 acttattccaggtatgtaatacagtattataccctacagtattttacatatactgtataa 159

                                                                       
Query: 301 acggtatactacatatactgcataaacagtatattacatatactatatatacagcataca 360
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 158 acggtatactacatatactgcataaacagcatattacatatactatatatacagcataca 99

                                                                       
Query: 361 ctatagtgtatacatactatagtagtgttacataatacttttggtatgtgaatgacaaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  ctatagtgtatacatactatagtagtgttacataatacttttggtatgtgaatgacaaag 39

                                                 
Query: 421 ctcacattcttttacattgttatactatcttttgaaag 458
           ||| ||||||||||||||||||| ||||||||||||||
Sbjct: 38  ctctcattcttttacattgttatgctatcttttgaaag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space:   433344
Effective search space used:   433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)