NNAAAACANTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAG
GATCCGCGGAATTCCACATTATTTTTCCATGAATCCAGCCCTTCAAAGGA
TAATAACAGAAAGAAAAAAAAAACAGTACAAGGACAGCACCACACCCTAG
AAAAAGCAAGAAAGTAATTAACAAACCTAAAAGAAGACAGCCACAAGAAT
AGAATGCCAACTCTAACAACAAGAATAATAAGAAGCAAGAATTACTTTTC
CTTAATATCTCTTAATATCAATGGACTCAATTCCCCAATAAAAAGACATA
GACTAACAGACTGGCTACACAAACAGGACCCAACATTTTGCTGCTTACAG
GAAACCCATCTCAGGGAATAATATAGACACTACCTTAAAATGAAATGCTG
GAAAACAATTTTCCAAGCAAATGGTCTGAAGAAACAAGCTGGATTAGCCA
TTCTAATATCTAAAAAAATTGACTTCCAACCCAAAGTTAGCAAAAAAGAA
AAGGAGGGAGACTCCATGATCATCAAAGGTAAAATCCTCTAAGAGGAACT
CTCAATTCTGAATATGTATGCTCCAAATGCAAGGGCAGCCACATTCATTA
AAGAAACTTTAGTAAAGCTTAAAACACACATTGCAACTCACACAATCATA
GTGGGAGACTTNCACACACCACTTTTCATCAGTGGAAAGATCATGGGAAC
AGAAACTATACAGGGACCCCGGGAAATTAACAGAAGTTTTGAACCCAATG
GATT

TAATCTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTTCTGCAATAGCAAT
ACTGGTTCATTTACAGCTATAGCACCATCACAAAGTGATTTTGTCTTAAA
CTTTCATGCTTTAATATTGTGGCAGTCTGAGTTACAATTCAGAATGAGTG
GAGAAGGAACAAACATTAGAACCCCAGGGTATCTTTTTAAAATATCACAA
AGTTCAAATACATACTTTCTTTCCTTATTCCATTCATTTGTCTTTCCTTG
TATCAAAGATACATTATCCAGTACCTACTTCTTCTTCTATAAAGATAAAC
CAAAGTACGAGGCATATAGCTATATTTTTAGGTGACTGAATTTTCTGAAA
CTCTGGGACTTAGTAGGATAGAACATGCCACATTTTAAGATTCCAGGAAG
TAGATAATGACTCTGCTGTGCAGGAATGGAAGCTGAAGAAAGCCTCAAAA
AACTCTCAGTGTGGATGGACAGAACTACAGTGTATTTGTGTATTTTTCAC
ATCTGGCCCAGGTTCACTTATATGACCTAAAATCTGCACAGCAGTCATAC
ATGATTGGAGAAAGAGTTTATAACAGTTTCCAAAAACACAAAGATTTCAG
ATACCAGGATCAAACTGGAGAATGATGCAACTTCTTGTTATGCATTATGT
GTTCTGTATTTGGACTTTTGCCAAATC

Query= MSMg01no345_p14.g1 MSMg01no345_p14.g1 CHROMAT_FILE:
MSMg01no345_p14.g1 PHD_FILE: MSMg01no345_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:32 2005
         (555 letters)



>mm_chr17_92223481_92224435
          Length = 955

 Score = 1004 bits (519), Expect = 0.0
 Identities = 546/555 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   acttctgcaatagcaatactggttcatttacagctatagcaccatcacaaagtgattttg 60
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 acttctgcaatagcaatactggttcatttacagctacagcaccatcacaaagtgattttg 260

                                                                       
Query: 61  tcttaaactttcatgctttaatattgtggcagtctgagttacaattcagaatgagtggag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttaaactttcatgctttaatattgtggcagtctgagttacaattcagaatgagtggag 320

                                                                       
Query: 121 aaggaacaaacattagaaccccagggtatctttttaaaatatcacaaagttcaaatacat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggaacaaacattagaaccccagggtatctttttaaaatatcacaaagttcaaatacat 380

                                                                       
Query: 181 actttctttccttattccattcatttgtctttccttgtatcaaagatacattatccagta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actttctttccttattccattcatttgtctttccttgtatcaaagatacattatccagta 440

                                                                       
Query: 241 cctacttcttcttctataaagataaaccaaagtacgaggcatatagctatatttttaggt 300
           ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 441 cctacttcttcttctataaagataaaccaaaataccaggcatatagctatatttttaggt 500

                                                                       
Query: 301 gactgaattttctgaaactctgggacttagtaggatagaacatgccacattttaagattc 360
           ||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||
Sbjct: 501 gactgaattttctgaaactctgggacttagtaggatagaacatggaatattttaagattc 560

                                                                       
Query: 361 caggaagtagataatgactctgctgtgcaggaatggaagctgaagaaagcctcaaaaaac 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 caggaagtagataatgactctgctgtgcaggaatggaagctgaagaaagcctcacaaaac 620

                                                                       
Query: 421 tctcagtgtggatggacagaactacagtgtatttgtgtatttttcacatctggcccaggt 480
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 621 tctcagtgtggatggacagaactacagtgtatttgtgtattcttcacatctggcccaggt 680

                                                                       
Query: 481 tcacttatatgacctaaaatctgcacagcagtcatacatgattggagaaagagtttataa 540
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcacttagatgacctaaaatctgcacagcagtcatacatgattggagaaagagtttataa 740

                          
Query: 541 cagtttccaaaaaca 555
           |||||||||||||||
Sbjct: 741 cagtttccaaaaaca 755


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space:   515025
Effective search space used:   515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)