Query= MSMg01no347_c10.b1 MSMg01no347_c10.b1 CHROMAT_FILE:
MSMg01no347_c10.b1 PHD_FILE: MSMg01no347_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:02 2005
(496 letters)
>mm_chr17_46099949_46100845
Length = 897
Score = 897 bits (464), Expect = 0.0
Identities = 486/494 (98%), Gaps = 3/494 (0%)
Strand = Plus / Plus
Query: 5 gaattctaggactcccagggctacacagagaaactgtctcaagccacccccctccaaaag 64
|||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 205 gaattctaggacacccagggctacacagagaaacagtctcaagccacccccc-ccaaaag 263
Query: 65 a--aaaagaaccacatggcttcctcaaaggccagtctgacatagctgacagcaaccttcc 122
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agaaaaagaaccacatggcttcctcaaaggccagtctgacatagctgacagcaaccttcc 323
Query: 123 taactactaaacagaatgtgcaacctccaaggagaaagggtggagtgggggacttgatgg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 taactactaaacagaatgtgcaacctccaaggagaaagggtggagtgggggacttgatgg 383
Query: 183 cttgactgcttcactccccacctcctctcttgtcccccagccttcttaatgaatgccaga 242
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 384 cttgactgcttcactccccacctcctctcttgtccctcagccttcttaatgaatgccaga 443
Query: 243 gcagccaatgggaagcttggaaaatccacaggctgcagcagctgtatgtcccagggaaga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcagccaatgggaagcttggaaaatccacaggctgcagcagctgtatgtcccagggaaga 503
Query: 303 agggctgccctgtcccaggaacccttattaaaaacagcctcctgcccctgggctccacac 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agggctgccctgtcccaggaacccttattaaaaacagcctcctgcccctgggctccacac 563
Query: 363 atgctgagagatttcaagaaaggaaaggaatccccccttccaggagccaccctctaagga 422
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 564 atgctgagagatttcaagaaaggaaaggaatccccgcttccaggagccaccctctaagga 623
Query: 423 aaaggaccttgggccccttcctgcctggacaaggctctctgactcaccgaaggtgaggct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 624 aaaggaccttgggccccttcctgcctggacaaggctctctgactcaccgaaggggaggct 683
Query: 483 gtacgctgggttgt 496
||||||||||||||
Sbjct: 684 gtacgctgggttgt 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 897
Length adjustment: 10
Effective length of query: 486
Effective length of database: 887
Effective search space: 431082
Effective search space used: 431082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_c10.g1 MSMg01no347_c10.g1 CHROMAT_FILE:
MSMg01no347_c10.g1 PHD_FILE: MSMg01no347_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:02 2005
(491 letters)
>mm_chr17_46252162_46253052
Length = 891
Score = 942 bits (487), Expect = 0.0
Identities = 490/491 (99%)
Strand = Plus / Minus
Query: 1 aaactgggggagggccagagggcaactgaatgggagcaccaacaggtgtgggggggtaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 aaactgggggagggccagagggcaactgaatgggagcaccaacaggtgtgggggggtaag 632
Query: 61 tttctgagaagtctcaggaaacaaaggcagagacacattcttgtgccactgaagtcagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tttctgagaagtctcaggaaacaaaggcagagacacattcttgtgccactgaagtcagca 572
Query: 121 gcatcaggacaatggcctgaaacacaaagagtataaacatgtggtttccttcttggtcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gcatcaggacaatggcctgaaacacaaagagtataaacatgtggtttccttcttggtcca 512
Query: 181 ggcacttgggccctaaccatgaggtaaacaagtctaacgaaacacacatcactctaggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ggcacttgggccctaaccatgaggtaaacaagtctaacgaaacacacatcactctaggca 452
Query: 241 aagacccaaaccctgaagtcatcccactggcccctggaaaagagatcaaagcccatggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aagacccaaaccctgaagtcatcccactggcccctggaaaagagatcaaagcccatggca 392
Query: 301 agctccactgttcacaagctcacccacagcaacctcgagccagtgtctttctagaagcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 agctccactgttcacaagctcacccacagcaacctcgagccagtgtctttctagaagcca 332
Query: 361 gtgggtaaaacaataggcagatacttatctaagagagacaatctgtcaaaccagaggaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gtgggtaaaacaataggcagatacttatctaagagagacaatctgtcaaaccagaggaat 272
Query: 421 gacccaaggagctcagggagacagagattgatcagggttgtgagttagtgcaggggaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gacccaaggagctcagggagacagagattgatcagggttgtgagttagtgcaggggaaga 212
Query: 481 gggcccggctg 491
|||||||||||
Sbjct: 211 gggcccggctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
