Query= MSMg01no355_h10.b1 MSMg01no355_h10.b1 CHROMAT_FILE:
MSMg01no355_h10.b1 PHD_FILE: MSMg01no355_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:55 2005
(457 letters)
>mm_chr17_50071287_50072148
Length = 862
Score = 785 bits (406), Expect = 0.0
Identities = 443/458 (96%), Gaps = 5/458 (1%)
Strand = Plus / Minus
Query: 5 gaattcgtcttcttaagactgg-----cctcccttcaggcccacagtgctgaaatcgggc 59
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 662 gaatttgtcttcttaagactggcctgtcctcccttcaggcccacagtgctgaaatcgggc 603
Query: 60 agaaggaccaggtgcggatgttcccatggaagcctaggccccagggaactcattctgtaa 119
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 602 agaaggaccaggtgcggatgttcccatggaggcctaggccccagggaactctttctgtaa 543
Query: 120 ggcttctgagatctgttgtcccctcctgcttctcagggggagtaatgaggaacaggggtg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ggcttctgagatctgttgtcccctcctgcttctcagggggagtaatgaggaacaggggtg 483
Query: 180 ccctggggatcaagggaggtcattttcagaaggtggtgggacacccagatgatgccccga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ccctggggatcaagggaggtcattttcagaaggtggtgggacacccagatgatgccccga 423
Query: 240 ggcttcttcaggaatccaccttcacttgtggccaaggaaagctggagagtgctggcaggt 299
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 422 ggcttcttcaggaatccaccttcactcgtggccaaggaaagctggagagtgctggcaggt 363
Query: 300 agcctttgtgtttagagttccacagctgtgagcctactaaggacagttccctgtgtgcac 359
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 362 ggcctttgtgtttagagttccacagctgtgagcctactaaggacagttttctgtgtgcac 303
Query: 360 ctaaagtatccctgagtgtgtgtccaggtcccttcctctagccactgtcccgaacactca 419
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 302 ctaaagtatccctgggtgtgtgtccaggtcccttcctccagccactgtcccgaacactca 243
Query: 420 ttctctccaggtttgtctctgtcaaggctctagggttg 457
||||||||||||||||| ||||||||||||||||||||
Sbjct: 242 ttctctccaggtttgtccctgtcaaggctctagggttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 862
Length adjustment: 10
Effective length of query: 447
Effective length of database: 852
Effective search space: 380844
Effective search space used: 380844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_h10.g1 MSMg01no355_h10.g1 CHROMAT_FILE:
MSMg01no355_h10.g1 PHD_FILE: MSMg01no355_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:55 2005
(466 letters)
>mm_chr17_49892829_49893691
Length = 863
Score = 866 bits (448), Expect = 0.0
Identities = 461/466 (98%), Gaps = 3/466 (0%)
Strand = Plus / Plus
Query: 1 taagaaaatatgggccccatcgtctgtactccaaatattctgcacgcaagtcaggtcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagaaaatatgggccccatcgtctgtactccaaatattctgcacgcaagtcaggtcatc 260
Query: 61 aggtttcctaaggttcctagctcattcttgcttctcatgcattatgtattttttttttag 120
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 aggtttcctaaggttcctagctcattcttgcttctcatgcattatgta--ttttttttag 318
Query: 121 gttggaaaaactaatagcatcctatttggaagaccaagatccagagagtcgactggaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gttggaaaaactaatagcatcctatttggaagaccaagatccagagagtcgactggaagt 378
Query: 181 tggcgctgatatgcgtaaaatccatcactgttttcatcattttaaggtaaatttcaatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tggcgctgatatgcgtaaaatccatcactgttttcatcattttaaggtaaatttcaatgt 438
Query: 241 ttccttctggtctcagccatatcctgccatgctccaactgcaataaaaactcttcctgtt 300
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttcc-tccggtctcagccatatcctgccatgctccaactgcaataaaaactcttcctgtt 497
Query: 301 gaccaactcttgaagcgccaagacccagcttcacacatgcagaaaacagcccaagcatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gaccaactcttgaagcgccaagacccagcttcacacatgcagaaaacagcccaagcatcc 557
Query: 361 aaccacgctgtgacaatcactgagcagctgcaggaattagatctaacttttccacaaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aaccacgctgtgacaatcactgagcagctgcaggaattagatctaacttttccacaaata 617
Query: 421 aactctggtcatggacttctaagtcctttgccaggaatctctgcct 466
|||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 618 aactctggccatggacttctaagtcctttgccaggaatctctgcct 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 863
Length adjustment: 10
Effective length of query: 456
Effective length of database: 853
Effective search space: 388968
Effective search space used: 388968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
