XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCATATTTGCTTCTCAGCCATTTTAGACTTCTCTGTTGAGAAATCTCTAT
TTAGATTAGTACTCTTATTTTAATTGTGTTATTTGGGTTATTGGTATCTA
ACTTCTGGAGTTCATTGTACAGTTTGGATACTAGCCCTCTGTCAGATACA
GAGTTGGGAAAGTTCATTTCCCAATCTGTAGGCTAGGTATTTATCCTTTT
GACAATGTCTTTGGGTTCACAGAAGATATGCAGTTTCATAAGGTCTCATT
GATAAATTGTTGTTCTTAGAGACTGAGCCATGGATGTACTTTTCAGGAAA
TTATTTCCTGCACCAATCCCTGTTTGGGTTTTTAATGCCTGGTCTAACCT
CCATTTTTCTATAGCTCATGACTTACATTGAATTTTCATTACTGTGAAAA
GAAACCATAAACAAGGAAATTCTTATAAAGAAAAATATTTGATTTGGGAC
TGTCTTGTACTTTCAGAGATTTAGTCCTTTTTCATCATGGCAGGAAGCAC
AGCTGCATTCAAGCAGACATGGTGCTGGAAGAGCTGACAGTTCCACATCT
TGATCTGCAAGTAGAAGATCACTGGACACAGTTTATTTGTTATTGATGTT
TTGTTTATTGGAGTCTTTGAATAATCTAGACTATAATGCTCTATTAGACA
AATCCCCTAGGAATATTTTTGTCCCATTCTGTAGACTATCCCTTAAGTTC
TTTAAAAG

CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAGATGATGTCCACCTGCACACATTACTCTCT
AGAAAAGAGACCATAAAGACTTTACATGAGGCTCTTAAAGCAGATAAATA
TTTTCACCAAGTTGGTGGAATAAGAAACTACACCCCTGCCCTGAATCAGA
AGATGTCCTGTACACTTTAGGCAAATAATCAGGAAATCAATCTCATTCCA
TATAGCCCCCAAAATAACTGAAAATGAACCTAATGAAGTAAATGAAAGTA
AACTATAGGGAAAACCTAAGATACCGAAGAAGGAATTTCGAGAAAGTAGA
ACATGATGCAGATACTTCTCATTTTCATGTAATAGAAAAATTATTTTTAT
GCAGATGGTTATTCTAGCTAATACAATACACAAATTCAATAGAAATGTAA
TAAGAAACCATTGTCAGCCTTCACAACATGCCATAGAATTCTCTAAATTT
ACATGGAATCATTAAAGAATAAGGAAAGCCAAGGCAACCACGAACAAAAG
ACCATCACGGAGGGTGTAATCTCCATACCTTATTTCAACGTATAACACAG
GACCATAGCATGATACTGCAACAAAAATAGACTTATACATCTATTAAATA
GAATGGAATACTGGGATATAATTTCACACAACTAACACTAACTGGAGTTT
TGGCCAAATTATCCAAAGGATGAATTTTTAAAAGAGACCCCCTGTTTTAA
CAGTGGGATGG

Query= MSMg01no356_b05.g1 MSMg01no356_b05.g1 CHROMAT_FILE:
MSMg01no356_b05.g1 PHD_FILE: MSMg01no356_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:42 2005
         (544 letters)



>mm_chr17_40876888_40877831
          Length = 944

 Score =  901 bits (466), Expect = 0.0
 Identities = 490/498 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   agatgatgtccacctgcacacattactctctagaaaagagaccataaagactttacatga 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 498 agatgatgtccacctgcacacattactctctagaaaagagaccataaagactctacatga 439

                                                                       
Query: 61  ggctcttaaagcagataaatattttcaccaagttggtggaataagaaactacacccctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ggctcttaaagcagataaatattttcaccaagttggtggaataagaaactacacccctgc 379

                                                                       
Query: 121 cctgaatcagaagatgtcctgtacactttaggcaaataatcaggaaatcaatctcattcc 180
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cctgaatcagaagatgtcctatacactttaggcaaataatcaggaaatcaatctcattcc 319

                                                                       
Query: 181 atatagcccccaaaataactgaaaatgaacctaatgaagtaaatgaaagtaaactatagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atatagcccccaaaataactgaaaatgaacctaatgaagtaaatgaaagtaaactatagg 259

                                                                       
Query: 241 gaaaacctaagataccgaagaaggaatttcgagaaagtagaacatgatgcagatacttct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gaaaacctaagataccgaagaaggaatttcgagaaagtagaacatgatgcagatacttct 199

                                                                       
Query: 301 cattttcatgtaatagaaaaattatttttatgcagatggttattctagctaatacaatac 360
           |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 198 cattctcatgtaatagaaaaattatttttatgcagatggttattctagctaatgcaatac 139

                                                                       
Query: 361 acaaattcaatagaaatgtaataagaaaccattgtcagccttcacaacatgccatagaat 420
           |||||||||||||||||| ||||| |||||||||||||||||||||| || |||||||||
Sbjct: 138 acaaattcaatagaaatgaaataacaaaccattgtcagccttcacaaaattccatagaat 79

                                                                       
Query: 421 tctctaaatttacatggaatcattaaagaataaggaaagccaaggcaaccacgaacaaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78  tctctaaatttacatggaatcattaaagaataaggaaagccaaggcaaccacgaacaaaa 19

                             
Query: 481 gaccatcacggagggtgt 498
           ||||||||||||||||||
Sbjct: 18  gaccatcacggagggtgt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space:   498756
Effective search space used:   498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)