Query= MSMg01no359_o14.b1 MSMg01no359_o14.b1 CHROMAT_FILE:
MSMg01no359_o14.b1 PHD_FILE: MSMg01no359_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:30 2005
(485 letters)
>mm_chr17_8435113_8435991
Length = 879
Score = 874 bits (452), Expect = 0.0
Identities = 473/482 (98%), Gaps = 6/482 (1%)
Strand = Plus / Minus
Query: 4 ggaattccttgtggagagcagagatctgcctgcctctgcctcctgagtgctaggatcaaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 ggaattccttgtggagagcagagatctgcctgcctctgcctcctgagtgctaggatcaaa 713
Query: 64 ggtgtgaaccctacacctggttgaactttttttaaaactgcacccagctagaaagtaaat 123
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 712 ggtgtgaaccctacacctggttgaacttttttaaaaactgcacccagctagaaagtaaat 653
Query: 124 ctcttctagaaaccacctcccccccaaaaaaaagacttacctgaaagaaataaaatccaa 183
||||||||| |||| ||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 652 ctcttctag-aacc----ccccccc-aaaaaaagacatacctgaaagaaataaaatccaa 599
Query: 184 taaaacagatttaactttgttaaggaccaaacagaaatcctgcattttgggctaaagtaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 taaaacagatttaactttgttaaggaccaaacagaaatcctgcattttgggctaaagtaa 539
Query: 244 tgtgggacaactactatgaagccacatctttctctgaaaacggggacttttctgacctcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tgtgggacaactactatgaagccacatctttctctgaaaacggggacttttctgacctcc 479
Query: 304 cttctccacccaagagggtaaagtgaaccacagaacactgctccccacccccacagctcc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cttctccacccaagagggtaaagtgaaccacagaacactgctccccacccccacagctcc 419
Query: 364 tacttcccccacctttacccagctttccagggctctcagtccacaccagatggcttccgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tacttcccccacctttacccagctttccagggctctcagtccacaccagatggcttccgt 359
Query: 424 tcaaatggccactgttccctggcctctgtagatggtatggagccgtggtctctcaagcgg 483
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 358 tcaaatggccactgttccctggcctctgtagatggtacggagccgtggtctctcaagcgg 299
Query: 484 tg 485
||
Sbjct: 298 tg 297
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 879
Length adjustment: 10
Effective length of query: 475
Effective length of database: 869
Effective search space: 412775
Effective search space used: 412775
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_o14.g1 MSMg01no359_o14.g1 CHROMAT_FILE:
MSMg01no359_o14.g1 PHD_FILE: MSMg01no359_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:31 2005
(251 letters)
>mm_chr17_8262862_8263512
Length = 651
Score = 462 bits (239), Expect = e-135
Identities = 248/251 (98%)
Strand = Plus / Plus
Query: 1 actcagcagcacagtctttagcctttagctgaagaaaggagcaggcagaaggcagtgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcagcagcacagtctttagcctttagctgaagaaaggagcaggcagaaggcagtgtca 260
Query: 61 cagagttagcattgggtctatagtttcattaccacaccttccctaagacgcagccatact 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 cagagttagcattgggtctatagtttcattaccacaccttccctaagacgcagccacact 320
Query: 121 caaggaacatgagcatgtcgtgaggtaatatgggacaggtggaggagagtggactagaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaggaacatgagcatgtcgtgaggtaatatgggacaggtggaggagagtggactagaca 380
Query: 181 gaaagggacaaaatcagcagaagttctgggagaattgctaatggaacgtgtgtgagtgtg 240
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 gaaaggggcaaaatcagcagaagttctgggagaattgctaatggaacgtgtgtgtgtgtg 440
Query: 241 tgtgtgtgtgt 251
|||||||||||
Sbjct: 441 tgtgtgtgtgt 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
