CTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCATTACCTCTCCTTTTACATTATTTTTAAGATTCATAGAACATGC
CACATTGTAGATAACTATAGAGGTTTATTTCACATATTTTTTTATTTTAA
TCTTTCTGAGCCAACAATAATTGAGTTGGGTGACATGACGGTGTTTTCAG
TCATACAAGGGGAAATCACATTCATAATAATGAAACTATGTGTTAAGAGA
TTCTCTTCTTCCTTGTTTATATAGCAGCACTGTTCTTCACTTCAAGTCAA
AGGGATTAATTTCCTTCTAAAGAACAGAACCTTCTGTGAATTGAATTAAC
TGGAGAGTTCAAAATGTTCATTACTGTAAAAGTAACTCCTTATTGAAACT
TCCAAGTGCTTATTCACAAAAACCCATTCTTATGAAATTCATGCTGACAT
CAGAGGTTACAGTGGATAAATGCTATTATCCCAGGTTTTAGGTGAGTAAA
CCATAAAATTAACTATAGGATTCTATTTTCTTATTTTTTTAACTTTTACT
TAATTATTTTGTTTATTTATATCTGAAATGTACTCCCCTCCAATCACAGA
ATTCTTTTCCCTTTCTCCCTACACTTTCACATCTGAGAGGTGCCCCTTAC
GGCAAATATCTGCTCCGAGTATTATAGGTGTATCCTTTCTCACTGAAGCC
ATATAATGTATTGTTGTGCTACACCGGTGCTGGGGGCCTAAAAC

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTAGCTGTGAGAAAGTCCTTGGCT
CAAGGCATTCATTGGTGCTTTCAGAACATAAAACAACAGCTAGATGTGGG
CATTTTGCAAATACTGGCAATACAGTATGATTAGATCTATGTGGCAAAAA
TCTGCAGAAATTTGAGGGAACTAAGGACTACACGAAAGAGAACCAACTTA
TCCAAGAAGTAAGATAAAATGTATGTGCAGGTTTGTCCACTGATAATTAA
GCAATAACATTCTGGTCTACACTGTATAAGAAGAGAGGATTTGAAGTATA
CTTCCATCAGCAAGGAGTATTACTATCTCTGCCAATTCTTATATCACTTA
ACCTCCCTGTCCCACACGAACACAAAAATGTGTAACTGAATATCAGCATC
TGAGTTAACAACAGGTTTATTTATGTTCATTAAATTGTAAAGCCAGTAAT
ACTGAAGAATTTAAAAAACCCATTGCCTACAAATTGACATAGATATTATA
TTAGACAATACCCTTTTGGAGTGATCACCAAATCGTATTACATATTAAAA
TTCTTTTACTGTAATAGATAATTGAATCCCCACCTATAATGGTGGCTAGA
CTTCCTTATTCTCCCAAGCCCTCCAAATTCTGGTACAAAGGCCGGGTAAT
TTCCTTCTAAAAAAGAATAAAAAATATTGGGGTTTAATTCCTCAAACCCT
ATTTGCCTATTACCTAACTTTGTGGG

Query= MSMg01no360_d10.g1 MSMg01no360_d10.g1 CHROMAT_FILE:
MSMg01no360_d10.g1 PHD_FILE: MSMg01no360_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:54 2005
         (491 letters)



>mm_chr17_40446252_40447142
          Length = 891

 Score =  714 bits (369), Expect = 0.0
 Identities = 462/493 (93%), Gaps = 4/493 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   actagctgtgagaaagtccttggctcaaggcattcattggtgctttcagaacataaaaca 60
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 actagctgtgagatagtccttggctcaaggcattcattggtgctttcagaacataaaaca 632

                                                                       
Query: 61  acagctagatgtgggcattttgcaaatactggcaatacagtatgattagatctatgtggc 120
           |||||||||||||| |||||||||||||||||||||||  | ||||||||||||||||||
Sbjct: 631 acagctagatgtggacattttgcaaatactggcaataccttgtgattagatctatgtggc 572

                                                                       
Query: 121 aaaaatctgcagaaatttgagggaactaaggactacacgaaagagaaccaacttatccaa 180
           |||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 571 aaatgtctgcagaaatttgaggggactaaggactacacgaaagagaaccaacttatccaa 512

                                                                       
Query: 181 gaagtaagataaaatgtatgtgcaggtttgtccactgataattaagcaataacattc-tg 239
           ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||
Sbjct: 511 gaagtaagataaaatgtatgtgcaggtctgtccactgataattaagcactaaca-tcttg 453

                                                                       
Query: 240 gtctacactgtataagaagagaggatttgaagtatacttccatcagcaaggagta-ttac 298
            ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| 
Sbjct: 452 ctctacactgtagaagaagagaggatttgaagtatacttccatcagcaaggggtattta- 394

                                                                       
Query: 299 tatctctgccaattcttatatcacttaacctccctgtcccacacgaacacaaaaatgtgt 358
           ||| |||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||
Sbjct: 393 tatttctgccaattcttatatcactttacctacctgtcccacacgaacacaaacatgtgt 334

                                                                       
Query: 359 aactgaatatcagcatctgagttaacaacaggtttatttatgttcattaaattgtaaagc 418
           |||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 333 aactaaatatcagcttctgagttaacaacaggtttatttgtgttcattaaattgtaaagc 274

                                                                       
Query: 419 cagtaatactgaagaatttaaaaaacccattgcctacaaattgacatagatattatatta 478
           |||||||||| |||||||| || || ||||||||||||||||||||| ||||||| ||||
Sbjct: 273 cagtaatactcaagaatttcaagaatccattgcctacaaattgacatggatattacatta 214

                        
Query: 479 gacaatacccttt 491
           |||||||| ||||
Sbjct: 213 gacaatactcttt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space:   423761
Effective search space used:   423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)