Query= MSMg01no360_g18.b1 MSMg01no360_g18.b1 CHROMAT_FILE:
MSMg01no360_g18.b1 PHD_FILE: MSMg01no360_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:10 2005
(483 letters)
>mm_chr17_75938856_75939737
Length = 882
Score = 880 bits (455), Expect = 0.0
Identities = 473/479 (98%), Gaps = 1/479 (0%)
Strand = Plus / Plus
Query: 5 gaattcttggttatccttctcataattcactgcatgaagttggctcagctcaggcaaggt 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttggttagctttctcataattcactgcatgaagttggctcagctcaggcaaggt 264
Query: 65 tggatccatctggcaattagaaaaaaacgcttcactcataccaaacttcatttaataagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggatccatctggcaattagaaaaaaacgcttcactcataccaaacttcatttaataagt 324
Query: 125 gcatgaaatgtttacaaattatgagttaagtgctttaaatcacacacaaataaaatttat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcatgaaatgtttacaaattatgagttaagtgctttaaatcacacacaaataaaatttat 384
Query: 185 tcttcataaatctggagattcccccaaaatattccaaagatgtccatatagcaaatcaca 244
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 385 tcttcataaatctggaggttcccccaaaatattccaaagatgtccatgtagcaaatcaca 444
Query: 245 tatcagaaaatgtaatttaaatcaggtgtaatcacagtacttggaaggctgaggcaagag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatcagaaaatgtaatttaaatcaggtgtaatcacagtacttggaaggctgaggcaagag 504
Query: 305 gactgccaagaatctgaggccaacctgggctctgagtgttgacataaaaggatggccgct 364
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 505 gactgccaagaatctgaggccaacctgggctctgagtgttgacataaa-ggatggccgct 563
Query: 365 taggaagtagccccaggaggatcacgactcacccagtgggctggtcccatcggcttcttc 424
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 taggaagtagcctcaggaggatcacgactcacccagtgggctggtcccatcggcttcttc 623
Query: 425 agtaacggctttcccacatgattaggcggaacttttgctaatgtttcctttaactgaca 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agtaacggctttcccacatgattaggcggaacttttgctaatgtttcctttaactgaca 682
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 882
Length adjustment: 10
Effective length of query: 473
Effective length of database: 872
Effective search space: 412456
Effective search space used: 412456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no360_g18.g1 MSMg01no360_g18.g1 CHROMAT_FILE:
MSMg01no360_g18.g1 PHD_FILE: MSMg01no360_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:10 2005
(430 letters)
>mm_chr17_76103019_76103849
Length = 831
Score = 764 bits (395), Expect = 0.0
Identities = 422/431 (97%), Gaps = 1/431 (0%)
Strand = Plus / Minus
Query: 1 ctcgcgcaaaagctgaagttttcctttagacagcttgccagcaaactatagaaattttgg 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ctcgagcaaaagctgaagttttcctttagacagcttgccagcaaactatagaaattttgg 572
Query: 61 ttcaagagcaaagcaaaacaattagaaactttacccagctatgcagaaccttgggcttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ttcaagagcaaagcaaaacaattagaaactttacccagctatgcagaaccttgggcttta 512
Query: 121 ctcgcggatgaggccatctgatggatttacggtatctcatcaatcaacggagcttccatt 180
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 511 ctcgcggatgaggccatctggtggatttacggtacctcatcaatcaacggagcttccatt 452
Query: 181 aggcttcagaatcaagatagatcaagttcccagttctatgagcagacaattggagtgccg 240
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 451 aggctacagaatcaagatagatcaagttcccagctctatgagcagacaattggagtgccg 392
Query: 241 agtgccccggtgacatggttgatttacaatcagtgatttggggacaaaaacacgggcatt 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 391 agtgccccggtgacatggttgatttacaatcagtgacttggggacaaaaacacgggcatt 332
Query: 301 gatgcacaacccttggctcagc-tatgctccactcttactgtaaatacaaagaaatggca 359
||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 331 gatgcacaagccttggctcagcctgtgctccactcttactgtaaatacaaagaaatggca 272
Query: 360 ttaagagaagcctcactgcaccctgtactcgcttccaagcaaggctttgtactctgtgta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ttaagagaagcctcactgcaccctgtactcgcttccaagcaaggctttgtactctgtgta 212
Query: 420 gagagagaatt 430
|||||||||||
Sbjct: 211 gagagagaatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 831
Length adjustment: 9
Effective length of query: 421
Effective length of database: 822
Effective search space: 346062
Effective search space used: 346062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
