NTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAATCTATTAAGGCTCCAGCTATGCCCTCTATAAATAGTGCAA
GTGATTCTTAGCGTGTCTGCATGGACTAGGTCTCTGGGAGTCCCTATTGT
TCACCAGGAGTTCATGGAAAAAGATACTATCTCCAGGGGAGAGGGTGCAC
AAGTGTTGGGGTGTTATCTGTGTTGTCTTGTATTCTTTACAATCATACTA
TGAGGTAGGCAGGCTGAGATTCAGCCATGGACTCTAGACCATTCATTCAT
AACTGCTTGGCTGCTACTTTGCAGATGTATCAGCTAGCTATCTTTATCTT
ATAAATATGGGATTCGAGGGTACTGAAAGCCCAATAACATGCCTAAGCTA
ATAGAACTCAGTAATATGCACATTAGCACAGATCATATGAAGCCAGATTC
CAGGACGTGGTTCCATGGGGCAACTGGTGAATATTTTTAAAAGAGATTCC
TGTTTCATCCCTACCCAACATGGGGAGAAAGAGGGCAACGTGGCCTGCCC
AAGGCTGCTCTGGGTCACTGCTGTTTGTGAAAGCCTTCAGAGCATGTGAA
GTACGACAACCGGTGCCTGTGCTATGGTCTGGCCTTCGCTGCTCAGGAAA
GGTTCTGATTTACCGTGAGAGTGTTCCACATTACCTTCTCTGCTGGCCCT
TGTCCTCTTTGTACCTTGGACTCTGTCTCCTTCTTGGATTTGTACCCTCT

TTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGG
CAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATG
CAAATCAAAACAACCCTAAGATTCCACCTCACACCAGTCAGAATGTCTAA
GATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAG
GAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGG
AAATCCGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGA
TCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTA
AGAAGGACACATGCTCCACTATGTTCATAGCAGCATTATTTATAATAGCC
AGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAA
AATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATG
AATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTG
AGTGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGAT
AAGTGGATATTATCCCAAAACCTAGGATACCCAAGATATAAGATACAATT
TCCTATACACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGGACACTA
TGCCCCN

Query= MSMg01no361_n06.b1 MSMg01no361_n06.b1 CHROMAT_FILE:
MSMg01no361_n06.b1 PHD_FILE: MSMg01no361_n06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:59 2005
         (576 letters)



>mm_chr17_74044256_74045231
          Length = 976

 Score = 1083 bits (560), Expect = 0.0
 Identities = 569/572 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaatctattaaggctccagctatgccctctataaatagtgcaagtgattcttagc 64
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 gaattcaatctacaaaggctccagctatgccctctataaatagtgcaagtgattcttagc 717

                                                                       
Query: 65  gtgtctgcatggactaggtctctgggagtccctattgttcaccaggagttcatggaaaaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 gtgtctgcatggactaggtctctgggagtccctattgttcaccaggagttcatggaaaaa 657

                                                                       
Query: 125 gatactatctccaggggagagggtgcacaagtgttggggtgttatctgtgttgtcttgta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gatactatctccaggggagagggtgcacaagtgttggggtgttatctgtgttgtcttgta 597

                                                                       
Query: 185 ttctttacaatcatactatgaggtaggcaggctgagattcagccatggactctagaccat 244
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 596 ttctttacaatcatactatgaggtaggcaggctgagattcagccatggactccagaccat 537

                                                                       
Query: 245 tcattcataactgcttggctgctactttgcagatgtatcagctagctatctttatcttat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tcattcataactgcttggctgctactttgcagatgtatcagctagctatctttatcttat 477

                                                                       
Query: 305 aaatatgggattcgagggtactgaaagcccaataacatgcctaagctaatagaactcagt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aaatatgggattcgagggtactgaaagcccaataacatgcctaagctaatagaactcagt 417

                                                                       
Query: 365 aatatgcacattagcacagatcatatgaagccagattccaggacgtggttccatggggca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aatatgcacattagcacagatcatatgaagccagattccaggacgtggttccatggggca 357

                                                                       
Query: 425 actggtgaatatttttaaaagagattcctgtttcatccctacccaacatggggagaaaga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 actggtgaatatttttaaaagagattcctgtttcatccctacccaacatggggagaaaga 297

                                                                       
Query: 485 gggcaacgtggcctgcccaaggctgctctgggtcactgctgtttgtgaaagccttcagag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gggcaacgtggcctgcccaaggctgctctgggtcactgctgtttgtgaaagccttcagag 237

                                           
Query: 545 catgtgaagtacgacaaccggtgcctgtgcta 576
           ||||||||||||||||||||||||||||||||
Sbjct: 236 catgtgaagtacgacaaccggtgcctgtgcta 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space:   546756
Effective search space used:   546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)