Query= MSMg01no368_o06.b1 MSMg01no368_o06.b1 CHROMAT_FILE:
MSMg01no368_o06.b1 PHD_FILE: MSMg01no368_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:28 2005
(368 letters)
>mm_chr17_69077461_69078228
Length = 768
Score = 658 bits (340), Expect = 0.0
Identities = 358/364 (98%), Gaps = 2/364 (0%)
Strand = Plus / Plus
Query: 5 gaattctctcttttc-ctgatttcctatatgcacagcccctcctagtaccttctgttagt 63
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctcttg-cactgatttcctatatgcacagcccctcctagtaccttctgttagt 263
Query: 64 agcctcaggcaactttctagcatgtctttataacaataaagcaaaggagtagaacatagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agcctcaggcaactttctagcatgtctttataacaataaagcaaaggagtagaacatagt 323
Query: 124 tctcacttgaatttcttctgtgtagccaaagcttttaccttcttctacaggcctatgtgg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctcacttgaatttcttctgtgtagccaaagcttttaccttcttctacaggcctatgtgg 383
Query: 184 cacaccagtgatgtactattactcagctggacttccactctggacgcatgggtagtttca 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 384 cacaccagtgatgtactattactcagctggacttccactctggacgcatgggtattttca 443
Query: 244 gtcttctcattagaagcactgctataataaatattcctggacatatgtcactttgcacac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtcttctcattagaagcactgctataataaatattcctggacatatgtcactttgcacac 503
Query: 304 gtgcttttagtataattctgcccatgccataaagaaagaaacacatgtactggttaattt 363
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 504 gtgcttttagtataattctgcccgtgccataaagtaagaaacacatgtactggttaattt 563
Query: 364 tata 367
||||
Sbjct: 564 tata 567
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_o06.g1 MSMg01no368_o06.g1 CHROMAT_FILE:
MSMg01no368_o06.g1 PHD_FILE: MSMg01no368_o06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:28 2005
(341 letters)
>mm_chr17_69224595_69225335
Length = 741
Score = 574 bits (297), Expect = e-168
Identities = 330/341 (96%)
Strand = Plus / Minus
Query: 1 cacatacaatgtgttaaactacccaaactctcttcctatttagaagctgaatttcgagac 60
||||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 541 cacatacaacgtattaagctacccaaactctcttcctatttagaagctgaatttctagac 482
Query: 61 attaccattacctctccagaatttcggaatcaccgagagaagcaaaagtcagcttgtcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attaccattacctctccagaatttcggaatcaccgagagaagcaaaagtcagcttgtcag 422
Query: 121 ctttaacacagtatagtgacatggagcggggatcagtgtaataaatgtgtacaaaccatg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttttaacacagtatagtgacatggagcggggatcagtgtaataaatgtgtacaaaccatg 362
Query: 181 gcttaaagtcacgggcttaaacaagaagaacccatgatctcagctgacagatagcaggtt 240
|||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||
Sbjct: 361 gcttaaagtcacgggcttaaacaagaagaatccatgatctcagccgacggatagcaggtt 302
Query: 241 cctaggctatataatcttttagcaagatggccaagtaaaggatgttcacagttcaaaatc 300
||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctaggcaacaaaatcttttagcaagatggccaagtaaaggatgttcacagttcaaaatc 242
Query: 301 caagtgtatcaaaaaaatctttagcgtatcaaagtcagcaa 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caagtgtatcaaaaaaatctttagcgtatcaaagtcagcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
