Query= MSMg01no368_p01.b1 MSMg01no368_p01.b1 CHROMAT_FILE:
MSMg01no368_p01.b1 PHD_FILE: MSMg01no368_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:31 2005
(370 letters)
>mm_chr17_78642263_78643032
Length = 770
Score = 630 bits (326), Expect = 0.0
Identities = 356/368 (96%), Gaps = 5/368 (1%)
Strand = Plus / Plus
Query: 5 gaattcttccaatt---tctgttaaaaagaaattaaaaggcgatggaggcattttacctg 61
|||||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcttccaagtaaat--gttaaaaagaaattaaaaggcgatggaggcattttacctg 261
Query: 62 ttattcgttagtgggttgcaggatggcttcatgggtaaggatgctctctgctaagcttgg 121
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 262 ttattcgttagtgggttgcaggatggcttcatgggtaaggatgctcactgctaagcttgg 321
Query: 122 tggtctgcatttaatccttggaatctgtgtgatggaaggagagaagggactcctgcaagt 181
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 322 tggtctgcatttaatccttggaacctgtgtgatggaaggatagaagggactcctgcaagt 381
Query: 182 tgtctccatacacacatgcacatccaatgcaaaaatgtagaaaattcttattatcaccac 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgtctccatacacacatgcacatccaatgcaaaaatgtagaaaattcttattatcaccac 441
Query: 242 tactattgatattagtattatggcaccacatattatttagaaggataaattcagaagtta 301
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 442 tactattgatattagtattatggcaccacatattaaagagaaggataaattcagaagtta 501
Query: 302 gaatatgaagagatcctctgtttgtaatagaggtggccctttgcataacctacctgtctg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gaatatgaagagatcctctgtttgtaatagaggtggccctttgcataacctacctgtctg 561
Query: 362 atcctaaa 369
||||||||
Sbjct: 562 atcctaaa 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_p01.g1 MSMg01no368_p01.g1 CHROMAT_FILE:
MSMg01no368_p01.g1 PHD_FILE: MSMg01no368_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:31 2005
(520 letters)
>mm_chr17_78807803_78808720
Length = 918
Score = 714 bits (369), Expect = 0.0
Identities = 388/395 (98%), Gaps = 2/395 (0%)
Strand = Plus / Minus
Query: 1 caggttaagttcatcttgacatttctgtgtgtggcacagtgacttccagccacttgtcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 caggttaagttcatcttgacatttctgtgtgtggcacagtgacttccagccacttgtcag 334
Query: 61 tcagccttaaagggtcgtaaacagtacttcagtcacatggtctctggacccgagcttctg 120
|||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 333 tcagccttaaagggtcgtaaacagtacttcagtcacgtggtctctggacc--agcttctg 276
Query: 121 aagctgtgggtcaggctccatccaaatggtgctgggtgagtggggattgaaagaagtctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aagctgtgggtcaggctccatccaaatggtgctgggtgagtggggattgaaagaagtctg 216
Query: 181 gctacagcaaacagtttcggaacacacccaaaatcaattagtggcttctggatcattcac 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 215 gctacagcaaacagtttcggaacacacccaaaaccaattagtggcttctggatcattcac 156
Query: 241 tggctgcactgtatgacttcattacagccttgtttctgaacacacagcgtgtgcactttg 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tggctgcactgtgtgacttcattacagccttgtttctgaacacacagcgtgtgcactttg 96
Query: 301 ccctgcatataccaccaagtactgactaatgccacctgaactgccttggctcaggatcga 360
||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 95 ccctgcacataccaccaagtactgactaatgccacctgaaccgccttggctcaggatcga 36
Query: 361 gactgttggagtaaaacacgcactgtaacgctttc 395
|||||||||||||||||||||||||||||||||||
Sbjct: 35 gactgttggagtaaaacacgcactgtaacgctttc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 918
Length adjustment: 10
Effective length of query: 510
Effective length of database: 908
Effective search space: 463080
Effective search space used: 463080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
