ACTCCTATTTCGAGAGAATCCGCGGAATTCACTAGGATTTCGCCTAGATA
AAAAACATACTAACAACCGAAGTACGGGATGAAACCAAAGCGCCTTTGCC
ATATTATATAGCAATCATCTCACCACTACAGATTGCACTGTTAATGGTGC
CATCAACTCCGGCTTTACCTGCTAGCTAGCATCTTATCTTGAGCTGCCAG
CTGGTTTACTGGAGAAATCCTATCTCCAGCATGCTGGAAAAGCCCCTTAT
TCTAACTGTGTGCTTCTACTGTCATCAGGGTAGTGGTCTAAATATCTGAT
CTGAGCCTACTGGCGGAATAAATAAGGCTGGCATGGAAACAGAACATGAA
TGTGCTGTAAGTCTTAGAGTCCTGACATTTTGGAAAAGAAAACATACTGA
AATGTATGAGTGACGGTTCAACATTAATAGCTAGAAGATAAAAACGGAAA
ATGGAAAACACTAACAATCACTGATTTATGCTGATTATCCGTAGTGCTCC
TAAGAACACATCACCAACTATGCAGGACAGGATACGTATGCTCAAAAATA
CTTCCAAAAGGACTAATGTTCCTAGCGTAGGTATTACAGAAAACACTTTA
GCGAGAAGACAAAGAGGCAAAAACAAGCAGACTTACGATGATGGCGATTT
TCTCTTTGGGTTTTGCTAGCTGCTTGGCCAACAAGTACTGCTCCCTGCCC
AGTTTTGCAAATCCCGGAAATCTGTN

GTGAGGATGNNAGAGGGAGAGTGGGGGTGGGGGAGGGNAGGAGGGAGAGG
AGAGGTAGGTGGGGTGNAGTGGGAGGGNNNTGGCGATGAXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXTTCTCTCTTCCACCCTTCTCCACAACACTAGCTAAGAGAG
AAGAGGGGGATACAAAGTGAAGGAAAGAGTCCTGAATAAGGTCAGAGGTC
AGAAAGCTGGAGATGTTATTGTTAGACAACTTCCTGCTGATTAGGGGCAT
TGAGTTCCTTGGGGCAAATTTCATCTTTGCTCTCAGGATGTCTAATTTCT
TCTTGTTTCTTCTTGGCACATGACTACTTAACAAACTTCTACCAACAACA
ACCAAGATCCCAACAACAATCCACTACTCTGTGCCCCAGAATTTGTATAC
CCTCTGAAAAGTCCCCAGAATTCCAAATGTCACACAATTGCAGAAACTAT
CTGCAGCTGACAAAATCACGCCCCTGCTAGAGAACGAGGCAAATCATAGT
CAGCTGCTGCAGACAATCTAATGTAGCCCCATATCTCACACCTGGGATTA
AAATAAAAACATGTTTTTATAATATTTTCTGAGTTTTTCAAAGAAGCCTA
AACCCCAAATTCCTCACAACACCAAGGTCTCCAGGAAGGAGCATCCATGC
CTGATTCTACGCTCAAAGTCACCCTGCCGGCCATAGGGATAGGTTCTCCC
TCCCCTCCATAAACTGTTTATCAGGATTTTCCCATTGATGTGTACCTTTT
TGTGGAGAGTTGAAAGTTTTGTGTACGATATATAAAN

Query= MSMg01no373_g03.b1 MSMg01no373_g03.b1 CHROMAT_FILE:
MSMg01no373_g03.b1 PHD_FILE: MSMg01no373_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:20 2005
         (614 letters)



>mm_chr17_5904773_5905789
          Length = 1017

 Score = 1129 bits (584), Expect = 0.0
 Identities = 605/614 (98%), Gaps = 5/614 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   ggaattcactaggatttcgcctagataaaaaacatactaacaaccgaagtacgggatgaa 64
           |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 ggaattcactaggaatt-gcctagataaaaaacatactaacaaccgaagtacgggatgaa 759

                                                                       
Query: 65  accaaagcgcctttgccatattatatagcaatcatctcaccactacagattgcactgtta 124
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 758 accaaagcgcctttgccatattatatagcaatcatctcactactacagattgcactgtta 699

                                                                       
Query: 125 atggtgccatcaactccggctttacctgctagctagcatcttatcttgagctgccagctg 184
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 atggtgccatcaactctggctttacctgctagctagcatcttatcttgagctgccagctg 639

                                                                       
Query: 185 gtttactggagaaatcctatctccagcatgctggaaaagccccttattctaactgtgtgc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gtttactggagaaatcctatctccagcatgctggaaaagccccttattctaactgtgtgc 579

                                                                       
Query: 245 ttctactgtcatcagggtagtggtctaaatatctgatctgagcctactggcggaataaat 304
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 578 ttctactgtcatcagggtagtggtctaaatatctgagctgagcctactggcggaataaat 519

                                                                       
Query: 305 aaggctggcatggaaacagaacatgaatgtgctgtaagtcttagagtcctgacattttgg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 aaggctggcatggaaacagaacatgaatgtgctgtaagtcttagagtcctgacattttgg 459

                                                                       
Query: 365 aaaagaaaacatactgaaatgtatgagtgacggttcaacattaatagctagaagataaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aaaagaaaacatactgaaatgtatgagtgacggttcaacattaatagctagaagataaaa 399

                                                                       
Query: 425 acggaaaatggaaaacactaacaatcactgatttatgctgattatccgtagtgctcctaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 acggaaaatggaaaacactaacaatcactgatttatgctgattatccgtagtgctcctaa 339

                                                                       
Query: 485 gaacacatcaccaactatgcaggacaggatacgtatgctcaaaaatacttccaaaaggac 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gaacacatcaccaactatgcaggacaggatacgtatgctcaaaaatacttccaaaaggac 279

                                                                       
Query: 545 taatgttcctagcgtaggtattacagaaaacact----ttagcgagaagacaaagaggca 600
           ||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||
Sbjct: 278 taatgttcctagcgtaggtattacagaaaacactttaattagcgagaagacaaagaggca 219

                         
Query: 601 aaaacaagcagact 614
           ||||||||||||||
Sbjct: 218 aaaacaagcagact 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1017
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1007
Effective search space:   608228
Effective search space used:   608228
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)