Query= MSMg01no373_m02.b1 MSMg01no373_m02.b1 CHROMAT_FILE:
MSMg01no373_m02.b1 PHD_FILE: MSMg01no373_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:47 2005
(151 letters)
>mm_chr17_69518545_69519095
Length = 551
Score = 271 bits (140), Expect = 2e-77
Identities = 146/148 (98%)
Strand = Plus / Minus
Query: 4 ctgtagctcacctcaagaagaaaggattgaggatgaagagaagaccgacatgcggaagat 63
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 351 ctgtagctcacctcaagaagaaaggattgaggatgaagagaagaccgagatgcggaagat 292
Query: 64 gggtgtacccagactgcacagtgacatttccctgatgctctctcaccatcagcaagctgg 123
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gggtgtacccagactgcgcagtgacatttccctgatgctctctcaccatcagcaagctgg 232
Query: 124 accgaggaaaccctgcgctcacaggacc 151
||||||||||||||||||||||||||||
Sbjct: 231 accgaggaaaccctgcgctcacaggacc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 551
Length adjustment: 8
Effective length of query: 143
Effective length of database: 543
Effective search space: 77649
Effective search space used: 77649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no373_m02.g1 MSMg01no373_m02.g1 CHROMAT_FILE:
MSMg01no373_m02.g1 PHD_FILE: MSMg01no373_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:47 2005
(470 letters)
>mm_chr17_69358829_69359697
Length = 869
Score = 804 bits (416), Expect = 0.0
Identities = 455/468 (97%), Gaps = 1/468 (0%)
Strand = Plus / Plus
Query: 3 aatccacctgcctctgcctcccaagtgctgggattaaaggaatgtgccaccatgcccagc 62
||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 203 aatccccctgcctctgcctcccaagtgctgggattaaaggcatgtgccaccatgcccagc 262
Query: 63 tcttaagatagtttttgatagatgacagatgtaggggaaacctagagaaacaaatgtggt 122
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 263 tcttaagatagtttttgatagatgacagatgtaggggaaacctagagaaacagatgtggt 322
Query: 123 agtgagggagggagcccaacaacttttgggatgatcctaaatgctctacacaagtcaaca 182
||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| ||
Sbjct: 323 agtgaggaagggagcccaacaacttttgggatgattctaaatgctctgcacaagtcagca 382
Query: 183 aaactccactctgatgtcagttaaactgagcctaatgggttcatggttctgagccccaat 242
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 383 aaactccactctgatgttagttaaactgagcctaatgggttcgtggttctgagccccaat 442
Query: 243 gattcatgtgctaaaacctcaatccccagtgtgatgtggtggggtggcaagatgattaga 302
| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggttcatgtgctaaaacctcaatacccagtgtgatgtggtggggtggcaagatgattaga 502
Query: 303 gagtgggaactaccttcaaaagggggtgaacatggttccctaagatgcgttggttctatc 362
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 503 gagtgggaactaccttcaaaagggg-tgaacatggttccctaagatgtgttggttctatc 561
Query: 363 aagactaaggcccacagtcttgacgtcttctgcacataacaattccctcttcttcctctt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aagactaaggcccacagtcttgacgtcttctgcacataacaattccctcttcttcctctt 621
Query: 423 ggagccagggctgaccagatgctggtcatcttgttatagcatcttgtt 470
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ggagccagggctgaccagatgctggtcatcttgttatagcatcttgtt 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 869
Length adjustment: 10
Effective length of query: 460
Effective length of database: 859
Effective search space: 395140
Effective search space used: 395140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
