Query= MSMg01no375_n19.b1 MSMg01no375_n19.b1 CHROMAT_FILE:
MSMg01no375_n19.b1 PHD_FILE: MSMg01no375_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:35 2005
(494 letters)
>mm_chr17_8208854_8209747
Length = 894
Score = 926 bits (479), Expect = 0.0
Identities = 488/491 (99%)
Strand = Plus / Plus
Query: 4 ggaattctcagctccttctccaaccctatgtctgcttagacactgcaatgcttcctgacg 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcagctccttctccaaccctatgtctgcttagacactgcaatgcttcctgaca 263
Query: 64 tggttataataatcctctgaacctgtaagccagccccaattacgtggttttctttacaag 123
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 264 tggttataataatcctctgaacctgtaagccagccccaatcacgtggttttctttacaag 323
Query: 124 tgtggccttggtcatggtgtctcttcacagcaatgaaaccgaaactaagacagatggctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtggccttggtcatggtgtctcttcacagcaatgaaaccgaaactaagacagatggctt 383
Query: 184 ctaacaagaatcctctatttcaggagaccacccagaccaccccacagccaagatgcaaaa 243
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctaacaagattcctctatttcaggagaccacccagaccaccccacagccaagatgcaaaa 443
Query: 244 cgtgtggtaaccaagaaagattgcagctacgtcttggtggctgtgttagagttaactctc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cgtgtggtaaccaagaaagattgcagctacgtcttggtggctgtgttagagttaactctc 503
Query: 304 tgcaaggtgaagctacaggctgctcatgcaactgtgagaaggatcagagcttagtacaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgcaaggtgaagctacaggctgctcatgcaactgtgagaaggatcagagcttagtacaat 563
Query: 364 tagcagcacttgagacacttgaggttctgaggtcagaacactgactgagtgactaaacag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tagcagcacttgagacacttgaggttctgaggtcagaacactgactgagtgactaaacag 623
Query: 424 cagatatttgaggtcagtggctaacaagtcacaaggcagggatggacatggcttcaacac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cagatatttgaggtcagtggctaacaagtcacaaggcagggatggacatggcttcaacac 683
Query: 484 cctaactaggt 494
|||||||||||
Sbjct: 684 cctaactaggt 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_n19.g1 MSMg01no375_n19.g1 CHROMAT_FILE:
MSMg01no375_n19.g1 PHD_FILE: MSMg01no375_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:35 2005
(420 letters)
>mm_chr17_7171427_7172246
Length = 820
Score = 791 bits (409), Expect = 0.0
Identities = 415/417 (99%)
Strand = Plus / Plus
Query: 1 actctctattttaaaaatgagaataaagagaactgattttggatccagaggcacaggtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctctattttaaaaatgagaataaagagaactgattttggatccagaggcacaggtct 260
Query: 61 gagatctagcaccaccctgacaagtttctctctgtctggctataaatgtgtacaaaatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagatctagcaccaccctgacaagtttctctctgtctggctataaatgtgtacaaaatgc 320
Query: 121 aaaagagtaacattcggatcttctccatcttctctgggaatgcaaggaaggaagccttaa 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaagagtaacattcggatcttccccatcttctctgggaatgcaaggaaggaagccttaa 380
Query: 181 ctgtagaaacctctgtaggaagtctcaggcgaggagaagtataggaagctacaatttaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtagaaacctctgtaggaagtctcaggcgaggagaagtataggaagctacaatttaaa 440
Query: 241 acagacttaaaagacatctttaaaacgtgaaattattgtgcttgaagatgccaacttgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagacttaaaagacatctttaaaacgtgaaattattgtgcttgaagatgccaacttgga 500
Query: 301 taataaaattataaaaaattaaaagaccgccacagaagccaggatagtttcttacaggta 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taataaaattataaaaaaataaaagaccgccacagaagccaggatagtttcttacaggta 560
Query: 361 atagctgtagagggctgggaggcttgcacagggagcctatctataaaggctgtctgg 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atagctgtagagggctgggaggcttgcacagggagcctatctataaaggctgtctgg 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
