NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTTGTTCTGCTCTGAGCCCCATTTTTAATGGGGTTATTTGATTT
TCTTGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCC
TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTATTGGTGGTCTT
TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGCAGTTTCAT
GAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTC
TACTCAGGAATTTTTCCCCTGTGTCCATATCTTCAAGGCTTTTCCCCACT
TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGAT
CCACTTAGATTTGATGTCCCTGCATTTCTTGTGGACAGGACAAATTTTGG
GTTGAAAATTTTGTGAGTGGGTTGGTGTCCTTATCCCTCCACTGGGGGTC
CTTCCAGGCTACAGGAAGTGGGCTACTTCAGGTTCCATATTCCCACTGCT
AAAGGTCTCAGCTAAAGTCACCTCCATAGACTTCCTGGGAGGCTTCCCAT
CCCGGGTCTCTGACATGTCCTATAGATGTTCACCAGCTACCAGTTTCCAT
TAATTTTCTTGGCCCTCTGGGCCTTTCTCCTTGGCTTTCTTTCCCCTTGA
TCCTGAAGGTTCCCACCCCCCATTTTTCCTTTCCACCCTTTTTCC

GAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGACACCAGGACTGGAGCTTTAGCC
TACTGATGCCTCCTTTTGTTCTTTCTCTCATCTACTTATTTGCAATTCAG
TCTTCTGTTTCCTCTCTGCCCTCTCCCTTTCCTCTCCTCCCTCTATTGAA
TTAATCTTGGCAGCAAGACTTGTTGTGGGGACACAGCTGACTCAGAACTC
TGTACCCTATAGATGAGGGAGGTTCAGAGGTACTGGAGGGAGCTTTGCTT
TATAACTTTCTTGTTTCTCTGATAAGGGAGCAGCCATGGAGAGTTTGACT
GACTTACTCAAGGTCAGAACACGGGGAGATGTGACTGAGTTGATACCTCA
GCTTCTCAACCCTATGTGCTACATTTCTGCAAGCCACATCCCCCTCATAG
TGGCCATGCAGAGACCATAACTGGACCTTTAGAGAAAGGGGCCAACTGTG
AAGAAGCCAATGGGGACAGGGGCTTGCTATCTGCCTGATTTGAAATGGGG
TGCCCAATGGCTTCCCATGAGGAAAGCTTCCCCTTGCTGCAACTTGAAGT
ATTGGAACAGGGAACAGGAATAGGAACTTCAGTGAGCCCAGAATAGCTTA
CTAGCTGTCCAAGCCGGTGGTCAAGGATTCTCTTTCAGAATCTCTCCGTC
TCTCTGTCTCTCTGGCTCTCTCTGACTCTCAAACA

Query= MSMg01no376_c13.g1 MSMg01no376_c13.g1 CHROMAT_FILE:
MSMg01no376_c13.g1 PHD_FILE: MSMg01no376_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:59 2005
         (525 letters)



>mm_chr17_73943299_73944224
          Length = 926

 Score =  775 bits (401), Expect = 0.0
 Identities = 422/429 (98%), Gaps = 1/429 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgacaccaggactggagctttagcctactgatgcctcc-ttttgttctttctctcatcta 59
           ||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 429 tgacaccaggactagagctttagcctactgatgcctccttttttttctttctctcatcta 370

                                                                       
Query: 60  cttatttgcaattcagtcttctgtttcctctctgccctctccctttcctctcctccctct 119
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 369 cttacttgcaattcagtcttctgtttcctctctgccctctccctttcctctcctctctct 310

                                                                       
Query: 120 attgaattaatcttggcagcaagacttgttgtggggacacagctgactcagaactctgta 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 attgaattaatcttggcagcaagacttgttgtggggacacagctgactcagaactctgta 250

                                                                       
Query: 180 ccctatagatgagggaggttcagaggtactggagggagctttgctttataactttcttgt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 249 ccctatagatgagggaggttcagaggtactggagggagctttgctttataactctcttgt 190

                                                                       
Query: 240 ttctctgataagggagcagccatggagagtttgactgacttactcaaggtcagaacacgg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttctctgataagggagcagccatggagagtttgactgacttactcaaggtcagaacacgg 130

                                                                       
Query: 300 ggagatgtgactgagttgatacctcagcttctcaaccctatgtgctacatttctgcaagc 359
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 129 ggagatgtgactgagttgatacctcagcttctcaaccatatgtgctacatttctgcaagc 70

                                                                       
Query: 360 cacatccccctcatagtggccatgcagagaccataactggacctttagagaaaggggcca 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  cacatccccctcatagtggccatgcagagaccataactggacctttagagaaaggggcca 10

                    
Query: 420 actgtgaag 428
           |||||||||
Sbjct: 9   actgtgaag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 926
Length adjustment: 10
Effective length of query: 515
Effective length of database: 916
Effective search space:   471740
Effective search space used:   471740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)