Query= MSMg01no376_g13.b1 MSMg01no376_g13.b1 CHROMAT_FILE:
MSMg01no376_g13.b1 PHD_FILE: MSMg01no376_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:18 2005
(498 letters)
>mm_chr17_25551365_25552262
Length = 898
Score = 926 bits (479), Expect = 0.0
Identities = 491/495 (99%)
Strand = Plus / Plus
Query: 4 ggaattcacacttttccctgcctgtccctgcgtaagaatgagttataacaggtggtgtga 63
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacacttggctctgcctgtccctgcgtaagaatgagttataacaggtggtgtga 263
Query: 64 gccaagatgacctgcagctatggagctggggtcagaggacagaagacagtgaaagggacc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gccaagatgacctgcagctatggagctggggtcagaggacagaagacagtgaaagggacc 323
Query: 124 gctaagttaagtgtggcaggtcgaaggctcgctgggccctgggtccctggaggctgggag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gctaagttaagtgtggcaggtcgaaggctcgctgggccctgggtccctggaggctgggag 383
Query: 184 gagttagccttatagagaatgaaactccagcacgtccaattccctgcctcctccaagatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagttagccttatagagaatgaaactccagcacgtccaattccctgcctcctccaagatt 443
Query: 244 caggtttttatttctagaagcttccatgtattattccctgttgagtggtggtttatgaag 303
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 444 caggtttttatttctagaagcttccatgtattagtccctgttgagtggtggtttatgaag 503
Query: 304 aggcttttgtggcccactggtgctgtggacaggagcctgcaacaagcaatgaggcttact 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aggcttttgtggcccactggtgctgtggacaggagcctgcaacaagcaatgaggcttact 563
Query: 364 gctcgccagcacactggggaccctcctctcccaatgaccccagtctcacctcacagaggc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gctcgccagcacactggggaccctcctctcccaatgaccccagtctcacctcacagaggc 623
Query: 424 ctccaagggaaagaaaacatggaggataccaagagaggggctcccagccccgcctacagg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctccaagggaaagaaaacatggaggataccaagagaggggctcccagccccgcctacagg 683
Query: 484 ggaggagctaaatta 498
|||||||||||||||
Sbjct: 684 ggaggagctaaatta 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_g13.g1 MSMg01no376_g13.g1 CHROMAT_FILE:
MSMg01no376_g13.g1 PHD_FILE: MSMg01no376_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:18 2005
(432 letters)
>mm_chr17_25731684_25732515
Length = 832
Score = 658 bits (340), Expect = 0.0
Identities = 352/356 (98%), Gaps = 2/356 (0%)
Strand = Plus / Minus
Query: 1 cagataaagcccatccagcagccccaggactcgagtgaagcagctctttttctaagtctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 cagataaagcccatccagcagccccaggactcgagtgaagcagctctttttctaagtctc 296
Query: 61 ggaactctgttcattaaagggaaccaccacgtttgggaagtgggagtagaagcaggcggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ggaactctgttcattaaagggaaccaccacgtttgggaagtgggagtagaagcaggcggg 236
Query: 121 accccgagtgagcaacaaggaataaggaacacccagtagcccaggctagcctcaaggtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 accccgagtgagcaacaaggaataaggaacacccagtagcccaggctagcctcaaggtga 176
Query: 181 cctcgaactgggctgcccctccagagtgtggggaatacaggcatgactcaaagccagggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 cctcgaactgggctgcccctccagagtgtggggaatacaggcatgactcaaagccagggc 116
Query: 241 ttccggatgctaggcaattagagacgggggtctcactctgcaaactgtcccagcactcct 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 115 ttccggatgctaggcaattagagacaggggtctcactctgcaaactgtcccagcactcct 56
Query: 301 tgtgcctcagtctccagcctg-tgaggattaaaggcgtgaaccatcccacatggaa 355
||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||
Sbjct: 55 tgtgcctcagtctccagcctgct-aggattaaaggcgtgaaccatcccatatggaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
